DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and Arl5c

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_997114.1 Gene:Arl5c / 217151 MGIID:3028577 Length:179 Species:Mus musculus


Alignment Length:179 Identity:74/179 - (41%)
Similarity:118/179 - (65%) Gaps:7/179 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSK---IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 62
            ||:|::|   |||::|.:::::|||.||||||||:....:.|.|..|:|.|||.:..:...|.:|
Mouse     1 MGQLIAKLMRIFGSQEHKVIIVGLDNAGKTTILYQFLTNEVVHTCSTIGSNVEEIVLRKTHFLMW 65

  Fly    63 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLP 127
            |:|||:.:|..|..||:..:.:|.|:|..||:|:...|.||::::....:::|.:||||||||:.
Mouse    66 DLGGQEALRSTWDTYYSNAEFVILVIDSTDRNRLLTTREELYKMLAHEALQNASVLIFANKQDVK 130

  Fly   128 DAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWL----TSN 172
            |:|...||.:.|.|:.|:|..|::|..||.:|:||..||.|:    |:|
Mouse   131 DSMTTAEISQFLTLSAIKDHPWHIQGCCALTGEGLPAGLQWMQAQATAN 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 74/179 (41%)
Arl5cNP_997114.1 Arl5_Arl8 3..172 CDD:133353 69/168 (41%)

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