DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and warf-1

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_501242.1 Gene:warf-1 / 191609 WormBaseID:WBGene00000190 Length:179 Species:Caenorhabditis elegans


Alignment Length:178 Identity:93/178 - (52%)
Similarity:125/178 - (70%) Gaps:4/178 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSKI----FGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNV 61
            ||...|||    |.|.|.|.||||||.||||||||||||.::|.||||:||||||||::.:...|
 Worm     1 MGLFFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTV 65

  Fly    62 WDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDL 126
            ||||||.|||.||::|:..|..|:||||.:|.:||.||:.||..::.:.|:.|:.:|:||||||:
 Worm    66 WDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDM 130

  Fly   127 PDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTSNHK 174
            |:|..|.|:.:.|.|..:::|.|::..:.|.||.||.|||:|:....|
 Worm   131 PNARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEGLMWVKKQMK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 92/176 (52%)
warf-1NP_501242.1 Arf_Arl 19..176 CDD:206644 84/156 (54%)

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