DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and arl-6

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:NP_497993.1 Gene:arl-6 / 183311 WormBaseID:WBGene00000193 Length:190 Species:Caenorhabditis elegans


Alignment Length:173 Identity:66/173 - (38%)
Similarity:105/173 - (60%) Gaps:6/173 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSKIF--GNKEMRILMLGLDAAGKTTILYKLKLGQ--SVTTIPTVGFNVETVTYKNVKFNVWDVG 65
            ||.:|  |.|::.|:::|||.:||||||.:||..:  |...:||||..|...:.:|:.|:.:|:.
 Worm     7 LSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMA 71

  Fly    66 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREM--RDAIILIFANKQDLPD 128
            ||.|.|..|..|:..:||:|||:|.:||.|::..:.||..::..:::  |...|:|.|||.|:|.
 Worm    72 GQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPG 136

  Fly   129 AMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTS 171
            ||...:|...|||...|...|.:..:||.:||||.:.:..|::
 Worm   137 AMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSA 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 66/173 (38%)
arl-6NP_497993.1 Arl6 19..180 CDD:206722 61/161 (38%)

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