DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf6 and arl5a

DIOPT Version :10

Sequence 1:NP_523751.2 Gene:Arf6 / 36699 FlyBaseID:FBgn0013750 Length:175 Species:Drosophila melanogaster
Sequence 2:XP_002936704.1 Gene:arl5a / 100490823 XenbaseID:XB-GENE-1004384 Length:179 Species:Xenopus tropicalis


Alignment Length:178 Identity:77/178 - (43%)
Similarity:120/178 - (67%) Gaps:3/178 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKLLSKI---FGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 62
            ||.|.:||   |.::|.:::::|||.||||||||:..:.:.|.|.||:|.|||.:...|.:|.:|
 Frog     1 MGILFAKIWRLFSHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMW 65

  Fly    63 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLP 127
            |:|||:.:|..|..|||.|:.:|.|||..||:||...|.||:::::..:::.|.:|:||||||:.
 Frog    66 DIGGQESLRSSWNTYYTNTEFVIIVVDSTDRERIAVTREELYKMLSHEDLKKAGLLVFANKQDVK 130

  Fly   128 DAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTSNHKL 175
            :.|...||.:.|.||.::|..|::|..||.:|:||.:||.|:.|..|:
 Frog   131 ECMTVAEISQYLKLTSVKDHPWHIQACCALTGEGLCQGLEWMMSRLKV 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf6NP_523751.2 P-loop containing Nucleoside Triphosphate Hydrolases 1..174 CDD:476819 76/175 (43%)
arl5aXP_002936704.1 Arl5_Arl8 3..175 CDD:133353 73/171 (43%)

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