DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trpm and trpm6

DIOPT Version :10

Sequence 1:NP_001401007.1 Gene:Trpm / 36694 FlyBaseID:FBgn0265194 Length:2056 Species:Drosophila melanogaster
Sequence 2:XP_031746734.1 Gene:trpm6 / 100487366 XenbaseID:XB-GENE-958179 Length:2036 Species:Xenopus tropicalis


Alignment Length:1954 Identity:630/1954 - (32%)
Similarity:934/1954 - (47%) Gaps:415/1954 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RSWIETNFQKRECIKFIPCPKDD-------------TKCCCGQAQITHQTIPGIESGSP------ 84
            :||||..|.||||.|.||..|:.             .:||||:....|   ||::.|.|      
 Frog     9 KSWIEGLFNKRECAKIIPSSKEPHRCHGGCQVCQNLIRCCCGRLIGDH---PGLDYGWPINPSPQ 70

  Fly    85 ---GDLWLPTKHTRPQPTDAYGTIEFQGGAHPTKAQYVRLSFDTRPELLVQLFTKEWNLELPKLL 146
               .:.|....||:|.||||:|||.||.|.|...|:|:|:|:||..|||:.|..|||.:|||||:
 Frog    71 EREDEEWSILNHTKPSPTDAFGTINFQDGDHTYHAKYIRISYDTTLELLMHLMIKEWQMELPKLV 135

  Fly   147 ITVQGGKANFDLQAKLKKEIRKGLLKAAKTTGAWIFTGGTNTGVTKQVGDALLLEGQQRTGRVVS 211
            |:|.||..||.|.:|:|:...|||:|||:||||||.|.|.|||.:|.|||||.....|...::.:
 Frog   136 ISVHGGIQNFKLPSKIKQVFGKGLVKAAETTGAWILTEGINTGASKHVGDALKAHASQHLRKICA 200

  Fly   212 IGIAPWGIVERNHELLGHNREVPC--HSISSPRSKLAVLNNRHAYFLLVDNGTQAKYGAELILRR 274
            :||.|||.:|...:|:|  ::|.|  .::.:|.|||..||:.|::|::||:||..|||.|:.|||
 Frog   201 VGIPPWGAIENQQDLIG--KDVVCLYQTLINPMSKLTSLNSMHSHFIMVDDGTVGKYGNEMKLRR 263

  Fly   275 KLEKFISNLKLHPSKNHWLKTNVTHSSTPVVCLVIEGGTNTIRAVLEYVTDSPPVPVVVCDGSGR 339
            .||.|||..|:|....         ...|||.||||||.|.|..|.|||..:||||||||:|:||
 Frog   264 NLEDFISLQKIHTRMG---------QGVPVVGLVIEGGPNVILMVWEYVRSTPPVPVVVCEGTGR 319

  Fly   340 AADLLAFVHKYASDGEEQPVLESMRDYLIGTIQKTFEVGLDQSEKLYQELLQCTRNKNLITVFRI 404
            |||:|||.||:.:|.|:  :...:::.::..|||||.:|..||..:...|::|...:..||:|..
 Frog   320 AADILAFTHKHTTDTEQ--ISPQLKEEILEMIQKTFNLGHRQSNHVLYILMECMERRASITIFDA 382

  Fly   405 QEKPEGEAQELDQTILTALFKSQHLSPPEQLSLALTWNRVDIARSEIFVYGQEWPNGALDEAMMQ 469
            :.:   |.|::|..|||||.|..::|..:||||||||||||||:..|.:|||.|..|:|::||..
 Frog   383 ESE---EQQDIDLAILTALLKGTNMSAQDQLSLALTWNRVDIAKKHILIYGQHWKVGSLEQAMQD 444

  Fly   470 ALEHDRIDFVKLLLENGVSMKKFLTIPRLEELYNTKHGPAN-TLGYILRDVRPHIPK-GYIYTLH 532
            ||..||:||||||:|.||:|.:||||..||||||||.||.| .|.:::|||:...|. .|..:|.
 Frog   445 ALVMDRVDFVKLLIEYGVNMHRFLTIGHLEELYNTKQGPTNLLLHHLVRDVKQSNPSPDYRISLI 509

  Fly   533 DIGLVINKLMGGAYRSYYTRRKFRPIYAKVMNSY------------------------------- 566
            |:||||..|:||||||.|||:.||.:|..:...:                               
 Frog   510 DVGLVIEYLIGGAYRSSYTRKSFRVLYNSLFRKHKKSVPSSSSSLAQSLSHLSINQSSQMSSKLE 574

  Fly   567 -------------ANAC-RKSSTYQYQRYAGANSLSLVTGLLPFTSEMALFEFPFNELLIWAVLT 617
                         |..| ||..|..:|:....:.::...     .:|...|.:|:|:||:||||.
 Frog   575 SPESTLHSQFFRTAQPCRRKDKTTCHQKSKKKDEVTCTE-----DNEPVGFIYPYNDLLVWAVLM 634

  Fly   618 KRQQMALLMWTHGEEALAKSLVSCKLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFS 682
            |||:||:..|.|||||:.|::::||||:||||||.:..:..:..|||:.|:|||......:|:.:
 Frog   635 KRQKMAMFFWQHGEEAMVKAVIACKLYRAMAHEAKQSTMVDDTSEELKKYSKEFGQLALDILENA 699

  Fly   683 YRQDAEKAQRLLTCELHSWSNQSCLSLAVAANHRALLAHPCSQVILADLWMGGLRTRKNTNFKVI 747
            ::.:.:.|.:|||.:|.:|||.:||.|||::..|..::|.|:|::|.|:|||.|:.||::..|||
 Frog   700 FKMNEQMAMKLLTYQLKNWSNSTCLKLAVSSTLRPFVSHTCTQMLLTDMWMGRLKMRKHSWLKVI 764

  Fly   748 LGLAMPFYIRQLDFKSKEELQQMPQTEEEHLENQNLDNDDSDRSQPDAESALLKAKRSISLRYRM 812
            ||:.:|.::..|:||:|.|:..:||:.|.|         ...|...|..|...|.:.........
 Frog   765 LGILLPPFVLMLEFKTKAEMSHVPQSLEFH---------QFSRLYVDPPSLSTKEEHITDFDAER 820

  Fly   813 GAGANNRDKALLADTYSVRDTKVHENGKVSLTDSDTAQFREFFNLSEYNEVKQHQPLRLKKKFYE 877
            |:.....|                :|.|:|                  |.:   ..|.:.:|..|
 Frog   821 GSKQPGED----------------QNQKIS------------------NGL---GILPITRKICE 848

  Fly   878 FYTAPITKFWADSIAYMFFLIMFSFTVLVKMEQMPRWQEWYSIAYITTLGFEKVREIISSEPVAI 942
            ||:|||.|||..::.|:.||::|::||||||:..|..|||..|.||.|...|||||:..|||...
 Frog   849 FYSAPIVKFWFHTMVYLAFLMLFTYTVLVKMDPQPSVQEWCVIIYIFTTAVEKVREVFVSEPGKF 913

  Fly   943 THKFSVWAWNMWNPCDGAAIILFVIGLAFRFRENTMD-IGRVIYCVDSIYWYLRILNILGVNKYL 1006
            :.|..||....||..|..||.||.||...|:.:.... .||:|||:|.|:||:|:|:...||:..
 Frog   914 SQKVKVWINEYWNLTDSIAIFLFFIGFGLRWPDPPFQTAGRIIYCLDIIFWYVRLLDFFAVNQQA 978

  Fly  1007 GPLVTMMGKMVKNMIYFVVLLAVVLMSFGVSRQAILYPNKQPTWSLIKEVIAGSITAPGFLGALG 1071
            ||.:||:|||..||...|:::|:||::|||||:|||.|:..|:|:|.::::              
 Frog   979 GPYITMLGKMTSNMFGIVIIMAIVLLAFGVSRKAILSPDHPPSWTLARDIV-------------- 1029

  Fly  1072 HNTRSSYHRGYHTMGAPPVTTTAASTTTGSSSTVPAATTSTTAPIHNEHSNLTSGNLTNVTFQPY 1136
                                                                         ||||
 Frog  1030 -------------------------------------------------------------FQPY 1033

  Fly  1137 FMLYGEVFAGDIDPPCGEDPSQPGCVTGHWVTPITMSMYLLIANILLINLLIAVFNNIFNEVNSV 1201
            :|::|||:||:|| .|.|||.   |..|.::||...::||.:..|:::||||::|||::..:|||
 Frog  1034 WMMFGEVYAGEID-ACEEDPD---CPPGSFITPFLQAVYLFVQYIIMVNLLISLFNNVYRVLNSV 1094

  Fly  1202 SHQVWMFQRFTVVMEYQQKPVLPPPFIALCHFYSLLKYCVRKAKGLEV---QRDNGLKLFLEKDD 1263
            ||::|.:.|:..:|.|.:||.||||.|.|.|.|.|:..........|.   :.|.||||:|..::
 Frog  1095 SHKLWKYNRYRYIMTYYEKPWLPPPLIFLSHIYILINRLCHHRSHSEFDPEETDMGLKLYLSDNE 1159

  Fly  1264 LERLYDFEEECVEGFFHEQEIILNQSTDERVKNTTERVETMSQKIEDINQKENIQTATVQNIEFR 1328
            |.:|:||||:|||.:|||:...|:.|.:||::.||||.|.|..:::::|.|......::.:::.:
 Frog  1160 LRKLHDFEEKCVETYFHEKNESLHSSKNERIRVTTERTEEMFAQLKEVNDKVFYIKDSLSSLDSQ 1224

  Fly  1329 LRKMEESSEQILSHLAVIHRF--MSTHTAGADDLRGSTI--------NIP-GEMQR--------- 1373
            |..:::.|...:..|.:|...  :....|...|.:|.|.        |:| ...||         
 Frog  1225 LGHLQDLSALTVDTLKIISAVDSLQVEEAFIKDKKGLTCKKLPHSWSNVPYSHHQREYNYYSMPP 1289

  Fly  1374 --MRTISISDTEGGSGPGGNGGGGGGGGAIVPLGLGAGLNLNSL------QVTTRRRFNRS---- 1426
              :||::.|...                              ||      |:|.:...:.|    
 Frog  1290 SLLRTLARSQCP------------------------------SLYQCPPQQLTAQLEIHNSEEPK 1324

  Fly  1427 -----LTEVRP-DAYIFDEGTHFEVVPL--PEEP---------DEVVKSREALNEQVVRKASMQS 1474
                 :|...| |:.......::.:||.  |..|         .:::...||::.|...|..:.|
 Frog  1325 IEVDIVTMAVPLDSKSAQHYGNYLLVPSVGPPAPTDSAFKETCSDMLSEGEAISVQATTKERICS 1389

  Fly  1475 EADSDIYIPVSQRPSTCETVKRTPYVTVRQDTGASTESKDTLTPMGNNDDDQTLVGGDNSDDATP 1539
             ..||..:...|:     .||.:...|:::|          |.|:..|.|:..   .:.|.:.:.
 Frog  1390 -IHSDQCLCSKQK-----HVKESSRKTMKED----------LKPLVTNTDESQ---NEESHECSC 1435

  Fly  1540 DINFEAARHRALRQRTVSLCRRNSETYSLT---GADINRSHISLNQLASLSRRQMSLTQSEPDSD 1601
            |            |.|..:....|.|.::.   |..:|.:.....:.|..|........|.|...
 Frog  1436 D------------QFTAHVTVETSITCNIIDPGGGYVNLAFSEEGETALFSGGSSKTLCSRPTQS 1488

  Fly  1602 KDAPIAQGSAHPGKSVLHAKPSR-NILLKLHSEYTSITDELESVCHMIASPTVSLPSNKASLDRP 1665
                 ::.:..|.||    ..|| |...:..|.|...|..|::..:...||..|...:|      
 Frog  1489 -----SKSNVFPNKS----DGSRANDRPEFGSGYKQKTSFLKNSLYRNNSPRGSSKRHK------ 1538

  Fly  1666 KTEMSRAEAAALLEKKHLKECEENDY-------MILEGLIESRGSIDASAQGFEIGVSIDYSHRY 1723
                         |||..|.|...|:       .:.....:.|.:...|.:.             
 Frog  1539 -------------EKKDGKICTIKDFAKPPESSKVTWAKEKLRSTFRKSVKD------------- 1577

  Fly  1724 PLRRETAVELSPSKPSVDG---DLMGGGEGGGAGGGDSSDTSGAGSCGAMVGISSGFQLKNERPW 1785
               :....:|.....:|||   ......|....|...|.|.....    .:.:||..||..:...
 Frog  1578 ---KPRPTQLQVPVITVDGCSQSTQMSSEPADCGSWKSEDEPSKN----RLTVSSFNQLSLDHMT 1635

  Fly  1786 QRNSSMEQQTYPSPLVPTRATSDFLNPPYE----------GRLFKKSSE------SLQKNSSTET 1834
            .....::.|.:...||   .||::|....|          ..||:.|.|      ||:.:.....
 Frog  1636 YMRQQLKTQEFERHLV---QTSEYLRQSREDLHNTTQLRRSSLFRNSDEVKKMAASLKASQDLSN 1697

  Fly  1835 DYSA 1838
            .|||
 Frog  1698 HYSA 1701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpmNP_001401007.1 LSDAT_euk 116..392 CDD:465665 132/277 (48%)
TRPV <872..1227 CDD:454755 131/355 (37%)
TRPM_tetra 1291..1346 CDD:465156 13/54 (24%)
trpm6XP_031746734.1 LSDAT_euk 105..370 CDD:465665 132/277 (48%)
TRPV <724..1119 CDD:454755 172/519 (33%)
TRPM_tetra 1187..1242 CDD:465156 13/54 (24%)
Alpha_kinase_ChaK2_TRPM6 1725..1963 CDD:341222
Blue background indicates that the domain is not in the aligned region.

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