DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8079 and SQS1

DIOPT Version :10

Sequence 1:NP_611023.1 Gene:CG8079 / 36689 FlyBaseID:FBgn0034002 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_014175.1 Gene:SQS1 / 855497 SGDID:S000005168 Length:767 Species:Saccharomyces cerevisiae


Alignment Length:807 Identity:137/807 - (16%)
Similarity:233/807 - (28%) Gaps:336/807 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLPAEEEDLADTVAKYDS----IELKSIQDL---ETCEQQQLLQYVEKLHGII--RKYDTKL--- 54
            |:|..|.||.|..|.::.    |..|:|:|.   ...:.:.:     |:.|:.  .:||:..   
Yeast    51 SIPLGEGDLDDVGADFNPGRAFISPKTIEDYYFGRDAKSRSM-----KMGGLRPGNRYDSSTDLQ 110

  Fly    55 ---ASYKQKLLHYVSREE--------------KVSCDKASQATESE----------LQECQYSME 92
               |:::::.:.:|..:|              |.....:.:..|.|          ..:.:|...
Yeast   111 AGRAAFRKRPMQFVKAKEVYDPSHNMIQKLRAKNETKNSEEIVEREADVFEEPGKMTSDVEYINN 175

  Fly    93 NDEDTNKKDQPNDLSATDAFS------------FVDEMRQAAKHAENLNNFVYEH---------- 135
            .|.:....|..|..|...:.|            ||||..|.:.....:.....|.          
Yeast   176 EDSENEDDDSQNSPSTDHSLSSNESKVEDGDLFFVDEEAQQSPDLTKIKRVCIEEIARPREVAIE 240

  Fly   136 -----TSGMY------------------------YDPKTGYYYNAEYGLYYDGNNGCYYSYD--- 168
                 |.|..                        |.|..||..|..:|::...::.....|:   
Yeast   241 FDPILTIGKVELSVSEGNESKEISVDVPNKGNKTYHPFAGYISNVLHGMHTSDSDNDELDYEIET 305

  Fly   169 --HAKDSYEFHSQAQV------------------------------------------QANDAAK 189
              :::..||..:.::|                                          :.|:...
Yeast   306 ENNSEPLYESSASSEVDQGFNYVGQRHNSRADNNLLPSPSPQLTEDIKCLSINGTKTFEGNNDNL 370

  Fly   190 PESEDEDLEVQFDE----------------LGGV------------------------ITD---- 210
            |....|:||..|.|                :|||                        :||    
Yeast   371 PSPASEELEFGFKEEDFVINTNDIVVSNIRMGGVDNSYYLRCYRLLGDYDFHWIDQDLLTDFVVD 435

  Fly   211 -----------------HETLKKIKAEK--------QKAKDQAEKSKRKAKKKK----------- 239
                             :..:.||:..:        ..:.|:.:..:..:.:..           
Yeast   436 ELGLPEDRLPAYLNFIKNSLIPKIEPAEPTYSDIPISDSSDEGDSYEGDSYEDDEDMASSVVHSD 500

  Fly   240 -----------SKKHSKKRSKK------ERRHKSKKRHRHSDDERSNDAEEGELSQSSDSSSDSS 287
                       :.||..:|.|.      |.:.|.||:....||..:.|.|..|..||..|....:
Yeast   501 IEEGLDDLIAYTLKHDTERFKTFETKSLETKGKGKKKKLLIDDALALDTETLETLQSKFSKRIET 565

  Fly   288 NEDSSSNTEDSSVPVFKAAGRFQDIAKKYPPSLRIIVQETNVESLKVGSLHLITYKGGSLGREGA 352
            ........||.   :.:......|:.||||..|.|                              
Yeast   566 KAKKRKAKEDF---IDQENRNSNDMLKKYPYGLHI------------------------------ 597

  Fly   353 HDVIIPDVNVSKCHLKFKYENKLGIYQCLDLGSRNGTILNGSPMSSDAMDLVHGSVITLGQTRLL 417
                        .::|.::|:.|         |||...|...|:..      ||:...:   ::.
Yeast   598 ------------QNIKDEFESFL---------SRNNDRLTFPPLDP------HGNKTVM---KIA 632

  Fly   418 CHVHEGNSTCGLCEPGLLIENSPPVVAAVASSTASVLSHKEQLKKLQRKYGLENEKFVDTSGNGQ 482
            .|.:..:|..|                 .|:.|:.|:   |::||  .|:...|...:|.....:
Yeast   633 KHYNMKSSKIG-----------------KANHTSVVV---EKIKK--TKWSSPNYSLIDQLMRQR 675

  Fly   483 SNY---------NDRAATRRVQV--GSSTDKEKTEVACVNTEIGSSNKGFKMLSKLGWQKGEKLG 536
            ..:         .::||..|.:.  |....||...|.....|||:.|.|.:||.||||:.||.||
Yeast   676 PVFMRIDIRRPREEQAAFERTKTIRGKFHVKEGEIVGQNAPEIGNENIGRRMLEKLGWKSGEGLG 740

  Fly   537 KTNASAGLLEPINVVANEGTSGLGNSD 563
             ...:.|:.|||.....:..|||.:|:
Yeast   741 -IQGNKGISEPIFAKIKKNRSGLRHSE 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8079NP_611023.1 OCRE_VG5Q 124..177 CDD:293883 12/96 (13%)
OCRE repeat 1 129..136 CDD:293883 1/21 (5%)
OCRE repeat 2 137..144 CDD:293883 2/30 (7%)
OCRE repeat 3 145..152 CDD:293883 3/6 (50%)
OCRE repeat 4 153..159 CDD:293883 1/5 (20%)
OCRE repeat 5 162..169 CDD:293883 1/11 (9%)
FHA_AGGF1 316..433 CDD:438738 17/116 (15%)
G-patch 516..560 CDD:396249 18/43 (42%)
SQS1NP_014175.1 R3H_G-patch 597..654 CDD:100075 17/136 (13%)
G-patch 721..764 CDD:396249 19/43 (44%)

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