| Sequence 1: | NP_611023.1 | Gene: | CG8079 | FlyBaseID: | FBgn0034002 | Length: | 601 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001346454.1 | Gene: | Rbm5 | MGIID: | 1933204 | Length: | 815 | Species: | Mus musculus |
| Alignment Length: | 602 | Identity: | 119/603 (20%) |
|---|---|---|---|
| Similarity: | 189/603 (31%) | Gaps: | 216/603 (36%) |
|
Fly 52 TKLASYKQKLLHYVSR-----EEKVSCDKASQATESELQECQYSMENDEDTN-------KKDQPN 104
Fly 105 DLSATDAFSFVDEMRQAA---------KHA-ENLNNFVYEHTSGMYYDPKTGYYYNAEYGLYYDG 159
Fly 160 NNGCYYSYDHAKDSYEFHSQAQVQANDAAKPESEDEDLEVQFDELGGVITDHETLKKIKAEKQKA 224
Fly 225 KDQAEKSKRKAKKKKSKKHS--------------------------KKRSKKERRHKSKKRHRHS 263
Fly 264 DDERSNDAEEGELSQSSDSSSDSSNEDSSSNTEDSSVPVFKAAGRFQDIAKKYPPSLRIIVQETN 328
Fly 329 VESLKVGSLHLITYKGGSLGREGAHDVIIPDVNVSKCHLKFKYENKLGIYQCL-DLGSRNGTILN 392
Fly 393 GSPMSSDAMDLVHGSVITLGQTRLLCHVHEGNSTCGLCEPGLLIENSPPVVAAVASSTASVLSHK 457
Fly 458 EQLKKLQRKYGLENEKFVDTSGNGQSNYNDRAATRRVQVG-----SSTDKEKTEVACVNTE---- 513
Fly 514 --IGSSNKGFKMLSKLGWQKGEKLGKTNASAGLLEPINVVANEGTSGLGNSDPVLSSSRTIDKRK 576
Fly 577 LANLKITQARYQRASDM 593 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG8079 | NP_611023.1 | OCRE_VG5Q | 124..177 | CDD:293883 | 18/54 (33%) |
| OCRE repeat 1 | 129..136 | CDD:293883 | 1/7 (14%) | ||
| OCRE repeat 2 | 137..144 | CDD:293883 | 6/7 (86%) | ||
| OCRE repeat 3 | 145..152 | CDD:293883 | 4/7 (57%) | ||
| OCRE repeat 4 | 153..159 | CDD:293883 | 2/6 (33%) | ||
| OCRE repeat 5 | 162..169 | CDD:293883 | 2/7 (29%) | ||
| FHA | 346..411 | CDD:278899 | 11/66 (17%) | ||
| G-patch | 516..560 | CDD:279867 | 16/44 (36%) | ||
| Rbm5 | NP_001346454.1 | RRM1_RBM5 | 93..179 | CDD:241196 | |
| zf-RanBP | 181..210 | CDD:279035 | |||
| RanBP2-type Zn finger | 185..204 | CDD:275375 | |||
| RRM2_RBM5 | 229..314 | CDD:241199 | |||
| Required for interaction with U2AF2. {ECO:0000250} | 321..809 | 117/596 (20%) | |||
| Sufficient for interaction with ACIN1, PRPF8, SFRS3, SNRPB, SNRPN, SNRNP70 and SNRNP200. {ECO:0000250} | 452..535 | 25/97 (26%) | |||
| OCRE_RBM5 | 455..510 | CDD:293887 | 19/57 (33%) | ||
| OCRE repeat 1 | 460..467 | CDD:293887 | 1/7 (14%) | ||
| OCRE repeat 2 | 468..475 | CDD:293887 | 6/7 (86%) | ||
| OCRE repeat 3 | 476..483 | CDD:293887 | 4/7 (57%) | ||
| OCRE repeat 4 | 484..491 | CDD:293887 | 2/7 (29%) | ||
| OCRE repeat 5 | 493..500 | CDD:293887 | 2/7 (29%) | ||
| G-patch | 743..787 | CDD:307632 | 17/46 (37%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | E1_KOG0154 | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||