DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8079 and RBM10

DIOPT Version :10

Sequence 1:NP_611023.1 Gene:CG8079 / 36689 FlyBaseID:FBgn0034002 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001191397.1 Gene:RBM10 / 8241 HGNCID:9896 Length:995 Species:Homo sapiens


Alignment Length:478 Identity:98/478 - (20%)
Similarity:154/478 - (32%) Gaps:189/478 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 NLNNFVYEHTSGMYYDPKTGYYYNAEYGLYYDGNNGCYYSYDHAKDSYEFHSQAQVQANDAAK-- 189
            :::.:.|:.|||.||||:||.||:.....||:..:..|..:|..:.:|   ..|..|:.|..|  
Human   633 DVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGERRTY---VPALEQSADGHKET 694

  Fly   190 --PESEDEDLEVQFDELGGVITDHETLKKIKAEKQKAKDQAEKSKRKAKKKKSKKHS-------- 244
              |..|.::.:.:          |:|    |..:|.|||....::...|:|::.|:|        
Human   695 GAPSKEGKEKKEK----------HKT----KTAQQIAKDMERWARSLNKQKENFKNSFQPISSLR 745

  Fly   245 ------------------KKRSKKERRHKSKKRHRHSDDERSNDAEEGELSQSSDSSSDSSNEDS 291
                              ||.:..||:|.|....:.:.|:|.:.......:.|.:|.|:...|  
Human   746 DDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVAAYSGESDSEEEQE-- 808

  Fly   292 SSNTEDSSVPVFKAAGRFQDIAKKYPPSLRIIVQETNVESLKVGSLHLITYKGGSLGREGAHDVI 356
                                                               :||.          
Human   809 ---------------------------------------------------RGGP---------- 812

  Fly   357 IPDVNVSKCHLKFKYENKLGIYQCLDLGSRNGTILNGSPMSSDAMDLVHGSVITLGQTRLLCHVH 421
                         :.|.||..:|.|                                        
Human   813 -------------EREEKLTDWQKL---------------------------------------- 824

  Fly   422 EGNSTCGLCEPGLLIENSPPVVAAVASSTASVLSHKEQLKKLQRKYGLENE-KFVDTSGNGQSNY 485
                .|.||.     ...|...|.:.....|.| ||:.|:..:|.:..||| :.::.:...|..|
Human   825 ----ACLLCR-----RQFPSKEALIRHQQLSGL-HKQNLEIHRRAHLSENELEALEKNDMEQMKY 879

  Fly   486 NDRAATRRVQVGSSTDKEK-------TEVACVNTE------IGSSNKGFKMLSKLGWQKGEKLGK 537
            .||||.||.:.|.....|.       ...|.|:.|      :||.|.|.:||..:||::|..||:
Human   880 RDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGR 944

  Fly   538 TNASAGLLEPINVVANEGTSGLG 560
              ...|::.||........||||
Human   945 --KKQGIVTPIEAQTRVRGSGLG 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8079NP_611023.1 OCRE_VG5Q 124..177 CDD:293883 17/49 (35%)
OCRE repeat 1 129..136 CDD:293883 1/6 (17%)
OCRE repeat 2 137..144 CDD:293883 5/6 (83%)
OCRE repeat 3 145..152 CDD:293883 4/6 (67%)
OCRE repeat 4 153..159 CDD:293883 2/5 (40%)
OCRE repeat 5 162..169 CDD:293883 1/6 (17%)
FHA_AGGF1 316..433 CDD:438738 10/116 (9%)
G-patch 516..560 CDD:396249 15/43 (35%)
RBM10NP_001191397.1 RRM1_RBM10 193..276 CDD:410147
ZnF_RBZ 280..304 CDD:197784
RanBP2-type Zn finger 282..301 CDD:275376
RRM2_RBM10 363..449 CDD:410148
OCRE_RBM10 629..692 CDD:293886 20/61 (33%)
OCRE repeat 1 635..642 CDD:293886 1/6 (17%)
OCRE repeat 2 643..650 CDD:293886 5/6 (83%)
OCRE repeat 3 651..658 CDD:293886 4/6 (67%)
OCRE repeat 4 659..666 CDD:293886 2/6 (33%)
OCRE repeat 5 668..675 CDD:293886 1/6 (17%)
G-patch 923..967 CDD:396249 17/45 (38%)
Blue background indicates that the domain is not in the aligned region.

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