DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8079 and Aggf1

DIOPT Version :10

Sequence 1:NP_611023.1 Gene:CG8079 / 36689 FlyBaseID:FBgn0034002 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001414708.1 Gene:Aggf1 / 310005 RGDID:1310888 Length:705 Species:Rattus norvegicus


Alignment Length:709 Identity:203/709 - (28%)
Similarity:316/709 - (44%) Gaps:150/709 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PAE-EEDLADTVAKYDSIELKSIQDLETCEQ-----------------------QQLLQYVEKLH 44
            ||. |.:||....|.:.:|    ::|.:|::                       |:|...||:|.
  Rat    10 PASPEPELAQLRRKVEKLE----RELRSCKRQVREVEKLLHHTERLYQNAESNNQELRTQVEELS 70

  Fly    45 GIIR--------KYDTKL-----ASYKQKLLHY--------VSREEKVSCDKAS---QAT----- 80
            .|:|        |.|.::     |::.....:|        :..:|...|.:.|   ||:     
  Rat    71 KILRCGKNEDNQKSDVEVQTESHAAWSSSDYYYQTYYKDDNLPSKETELCAQQSPYVQASALDSK 135

  Fly    81 -ESELQECQYSMENDEDTNKKDQPN-------------DLSATDAFSFVDEMRQAAKHAENLNNF 131
             ||.:....||.|..|..|.:.:.:             :.||.:..|..:.:|.||:.|.:..:|
  Rat   136 AESRIDSESYSTEMAESVNHRHEDHFTSDSQESASALAEGSALEGSSLAESLRAAAEAAVSQTSF 200

  Fly   132 VYEHTSGMYYDPKTGYYYNAEYGLYYDGNNGCYYSYDHAKDSYEFHSQAQVQ--ANDAAKPESED 194
            .|:.::|:|:|..||:||::|..||||.:.|.||..|.....|:|||:..:|  ...:.|| |:|
  Rat   201 TYDESTGLYFDHSTGFYYDSENQLYYDASTGIYYYCDVESGRYQFHSRVHLQPYQTSSTKP-SKD 264

  Fly   195 EDLEVQFDELGGVITDHETLKKIKAEKQKAKDQAEKSKRKAKKKKSKKHSKKRSKKERRHKSK-- 257
            :.|:.:..|.|......|  |.:.:|.||.   .........:.::..:.||:::.:..|||.  
  Rat   265 KKLKKRRKEPGFWTATEE--KDLSSEDQKV---CSIEYINCSEDENSGNVKKKARTDTSHKSSPL 324

  Fly   258 ------------------------KRHRHSDDERSNDAEEGELSQSS-----DSSSDSSNEDSSS 293
                                    :|.|.|:.|    .||||::.|.     |....|.:..||.
  Rat   325 PLAGAVSGDMVESPGDEASASLKDERERASESE----PEEGEITDSQSECSYDGDPSSGDRQSSE 385

  Fly   294 NTEDSSVPVFKAAGRFQDIAKKYPPSLRIIVQETNVESLKVGSLHLIT-YKGGSLGREG--AHDV 355
            .::|.           .|..|.:||.:|:||..:.|  |::|||.:|| ....::|||.  .|.|
  Rat   386 ESDDE-----------DDEEKIWPPCIRVIVIRSPV--LQMGSLFIITAVSPATIGREKDMEHTV 437

  Fly   356 IIPDVNVSKCHLKFKYENKLGIYQCLDLGSRNGTILNGSPM-----SSDAMDLVHGSVITLGQTR 415
            .||:|.|||.|.:..:::.|..|..:|.||:||||:||..:     ..|...|.||..:.:|:|.
  Rat   438 RIPEVAVSKFHAEVYFDHDLQSYVLVDQGSQNGTIVNGKQILQPKTKCDPYILEHGDEVKIGETV 502

  Fly   416 LLCHVHEGNSTCGLCEPG------LLIENSPPVVAAVASSTASVLSHKEQLKKLQRKYGLENEKF 474
            |..|:|.|:.||..||||      .|.:...|:|....|.....|..::.|||::.||||:|..:
  Rat   503 LSFHIHPGSETCDGCEPGQVRAHLRLDKKDEPLVGPALSKEEKELERRKALKKIRVKYGLQNTDY 567

  Fly   475 VDTSGNGQSNYNDRAATRRVQVGSSTDKEKTEV-ACVNTEIGSSNKGFKMLSKLGWQKGEKLGKT 538
            .|........|.|||..||.||||....::.:. |.|::||..||||.|||.|:||:|||.|||.
  Rat   568 EDEKALKNPKYKDRAGKRREQVGSEGTFQRDDAPASVHSEITDSNKGRKMLEKMGWKKGEGLGKD 632

  Fly   539 NASAGLLEPINVVANEGTSGLGNSDPVLSSSRTIDKRKLANLKITQARYQRASDMFGQS 597
              ..|:..||.:......:|||...|    |...|...|.|.  ::..:.:|.:.|.::
  Rat   633 --GGGMKTPIQLQLRRTHAGLGTGKP----SSIDDVHFLQNK--SKKNWDKARERFAEN 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8079NP_611023.1 OCRE_VG5Q 124..177 CDD:293883 20/52 (38%)
OCRE repeat 1 129..136 CDD:293883 2/6 (33%)
OCRE repeat 2 137..144 CDD:293883 3/6 (50%)
OCRE repeat 3 145..152 CDD:293883 4/6 (67%)
OCRE repeat 4 153..159 CDD:293883 3/5 (60%)
OCRE repeat 5 162..169 CDD:293883 3/6 (50%)
FHA_AGGF1 316..433 CDD:438738 49/124 (40%)
G-patch 516..560 CDD:396249 20/43 (47%)
Aggf1NP_001414708.1 None

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