| Sequence 1: | NP_611023.1 | Gene: | CG8079 / 36689 | FlyBaseID: | FBgn0034002 | Length: | 601 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_035381.2 | Gene: | Rbm6 / 19654 | MGIID: | 1338037 | Length: | 1118 | Species: | Mus musculus |
| Alignment Length: | 513 | Identity: | 106/513 - (20%) |
|---|---|---|---|
| Similarity: | 165/513 - (32%) | Gaps: | 191/513 - (37%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 96 DTNKKDQPNDLSATDAFSFVDEMRQAAKHAENLNNFVYEHTSGMYYDPKTGYYYNAEYGLYYDGN 160
Fly 161 NGCYYSYDHAKDSYEFHSQAQVQANDAAKPESEDEDLEVQFDELGGVITDHETLKKIKAEKQKAK 225
Fly 226 DQAEKSKRKAKKKKSKKHSKKRSKKERRHKSKKRHRHSDDERSNDAEEGELSQSSDSSSDSSNED 290
Fly 291 SSSNTEDSSVPVFKAAGRFQDIAKKYPPSLRIIVQETNVESLKVGS--LHLI-TYKGGSLGREGA 352
Fly 353 HDVIIPDVNVSKCH-----LKFKYE-------NKLGIYQCLDLGSRNGTILNGSPMSSDAMDLVH 405
Fly 406 GSVITLGQTRLLCHVHEGNSTCGLCEPGLLIENSPPVVAAVASSTASVLSHKEQLKKLQRKYGLE 470
Fly 471 NEKFVDTSGNGQS---NYNDRAATRRVQVGSSTDKEKTEVACVNTEIGSSNKGFKMLSKLGWQKG 532
Fly 533 EKLGKTNASAGLLEPINVVANEG-TSGLGNSDPVLSSSRTIDKR-KLANLKITQARYQ 588 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG8079 | NP_611023.1 | OCRE_VG5Q | 124..177 | CDD:293883 | 12/52 (23%) |
| OCRE repeat 1 | 129..136 | CDD:293883 | 1/6 (17%) | ||
| OCRE repeat 2 | 137..144 | CDD:293883 | 4/6 (67%) | ||
| OCRE repeat 3 | 145..152 | CDD:293883 | 0/6 (0%) | ||
| OCRE repeat 4 | 153..159 | CDD:293883 | 3/5 (60%) | ||
| OCRE repeat 5 | 162..169 | CDD:293883 | 0/6 (0%) | ||
| FHA | 346..411 | CDD:278899 | 11/76 (14%) | ||
| G-patch | 516..560 | CDD:279867 | 15/44 (34%) | ||
| Rbm6 | NP_035381.2 | Pentapeptide_4 | 173..235 | CDD:404485 | |
| RRM1_RBM6 | 456..533 | CDD:409753 | |||
| RRM2_RBM6 | 651..737 | CDD:409979 | |||
| OCRE_RBM6 | 763..828 | CDD:293882 | 25/121 (21%) | ||
| OCRE repeat 1 | 769..776 | CDD:293882 | 1/1 (100%) | ||
| OCRE repeat 2 | 785..792 | CDD:293882 | 2/25 (8%) | ||
| OCRE repeat 3 | 793..800 | CDD:293882 | 4/6 (67%) | ||
| OCRE repeat 4 | 801..807 | CDD:293882 | 3/13 (23%) | ||
| OCRE repeat 5 | 811..818 | CDD:293882 | 1/8 (13%) | ||
| G-patch | 1046..>1079 | CDD:396249 | 12/37 (32%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0154 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||