DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8079 and aggf1

DIOPT Version :10

Sequence 1:NP_611023.1 Gene:CG8079 / 36689 FlyBaseID:FBgn0034002 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_012822835.1 Gene:aggf1 / 100145680 XenbaseID:XB-GENE-6052300 Length:709 Species:Xenopus tropicalis


Alignment Length:672 Identity:201/672 - (29%)
Similarity:306/672 - (45%) Gaps:141/672 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DTVAKYDSIELKSIQ-DLETCEQ-----QQLLQYVEKLHGIIRKYDTKLASYKQKLLHYVSRE-- 68
            ||.|.. .:.::::: :||||.|     |:.|.:.|:||......:.:|    ||.:..:|||  
 Frog    64 DTTAAL-CLRVRTLEAELETCRQELRDIQRRLSHSERLHRCTETRNLEL----QKQVEQLSRELH 123

  Fly    69 EKVSCDKASQATESELQECQY---------SMEND---------------EDTNKKD-------- 101
            |:    |.::.|..|:|...|         |..||               ||:|...        
 Frog   124 ER----KRAEQTAQEVQTDGYYGWAQSDYCSSGNDYSGFAPGMSEQVSVTEDSNSSQVVAEAVLN 184

  Fly   102 -------------QPNDLSATDA-----FSFVDEMRQAAKHAENLNNFVYEHTSGMYYDPKTGYY 148
                         |.:.:.|..|     .|..|.:|..|:.|.....|||:..:|||||..||:|
 Frog   185 KAGASSGQFVEEVQEDTVYAQQAEEEQGCSLADSLRATAEAAVTQTGFVYDENTGMYYDHSTGFY 249

  Fly   149 YNAEYGLYYDGNNGCYYSYDHAKDSYEFHSQAQVQANDAAKPESEDEDLEVQFDELGGVITDHET 213
            |::|..|||||..|.||..|.....|.:||:..:|:.....|:.                     
 Frog   250 YDSESQLYYDGTTGIYYYCDVDSGRYLYHSRVDLQSFTDTNPQP--------------------- 293

  Fly   214 LKKIKAEKQKAKDQAEKSKRKAKKKKSKK--H-------------SKKRSKKERRHKSKKRHRHS 263
             .|.|..|:|.:|.|...|.:.|:|.::|  |             .:|:::.....:|.:|...|
 Frog   294 -TKDKRSKKKRRDPASMEKEEEKEKDTEKMEHEPVSPPEREELAAERKKARMGSLVESYERESSS 357

  Fly   264 DDERSNDAEEGELSQSSDSSSDSSNEDSSSN---TEDSSVPVFKAAGRFQDIAKKYPPSLRIIVQ 325
            .||  ::.||||:: .||:...||::|.||.   |..:|.|        :|..:.:||.:|:.|.
 Frog   358 SDE--SEPEEGEIT-DSDNEKTSSDDDRSSGLSVTSHTSEP--------EDPERIWPPCIRVTVV 411

  Fly   326 ETNVESLKVGSLHLITY-KGGSLGREG--AHDVIIPDVNVSKCHLKFKYENKLGIYQCLDLGSRN 387
            .:.|  |:.|:|.:||. |..::|||.  .|.:.||::.:||.|.:..:::.|..|..:|.||:|
 Frog   412 RSPV--LQKGTLFIITADKTATIGREKDLGHTIRIPELGISKFHAEVYFDHNLQSYVLVDQGSQN 474

  Fly   388 GTILNGSPM-----SSDAMDLVHGSVITLGQTRLLCHVHEGNSTCGLCEPG------LLIENSPP 441
            ||::||:.:     .|....|.||..:..|:|.|..|||.|:.||..||||      .|.:....
 Frog   475 GTVINGNHILQPKEVSQPCVLQHGDEVKFGETVLSFHVHPGSETCDGCEPGQVRAHLRLNKKEEH 539

  Fly   442 VVAAVASSTASVLSHKEQLKKLQRKYGLENEKFVDTSGNGQSNYNDRAATRRVQVGSSTDKEKTE 506
            ....|.:.....|..|:.|||::.||||::..:.|........|.|||..||..|||....:|.|
 Frog   540 SAGPVLTKEGKELLRKQGLKKIRAKYGLQSADYEDNKVLTNPKYKDRAGRRRQVVGSDGTFQKEE 604

  Fly   507 V-ACVNTEIGSSNKGFKMLSKLGWQKGEKLGKTNASAGLLEPINVVANEGTSGLGNSDP--VLSS 568
            . |.|:.||..:|||.|||.|:||:|||.|||  :|.|:.:||.:...:..:|||..:|  :...
 Frog   605 APASVHVEINDNNKGRKMLEKMGWKKGEGLGK--SSDGIRDPIQLQLRKKKAGLGAQNPTSIEDI 667

  Fly   569 SRTIDKRKLANLKITQARYQRA 590
            ..|...:|  |.:..:.||..|
 Frog   668 QPTTQNKK--NWEKARERYAEA 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8079NP_611023.1 OCRE_VG5Q 124..177 CDD:293883 24/52 (46%)
OCRE repeat 1 129..136 CDD:293883 3/6 (50%)
OCRE repeat 2 137..144 CDD:293883 5/6 (83%)
OCRE repeat 3 145..152 CDD:293883 4/6 (67%)
OCRE repeat 4 153..159 CDD:293883 3/5 (60%)
OCRE repeat 5 162..169 CDD:293883 3/6 (50%)
FHA_AGGF1 316..433 CDD:438738 45/124 (36%)
G-patch 516..560 CDD:396249 20/43 (47%)
aggf1XP_012822835.1 ATG16 27..>133 CDD:462536 22/77 (29%)
OCRE_VG5Q 225..278 CDD:293883 24/52 (46%)
OCRE repeat 1 230..237 CDD:293883 3/6 (50%)
OCRE repeat 2 238..245 CDD:293883 5/6 (83%)
OCRE repeat 3 246..253 CDD:293883 4/6 (67%)
OCRE repeat 4 254..260 CDD:293883 3/5 (60%)
OCRE repeat 5 263..270 CDD:293883 3/6 (50%)
FHA_AGGF1 402..525 CDD:438738 45/124 (36%)
G-patch 616..658 CDD:396249 21/43 (49%)

Return to query results.
Submit another query.