DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Lap1 and AT4G16095

Sequence 1:NP_001188938.1 Gene:Lap1 FlyBaseID:FBgn0033984 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_680706.1 Gene:AT4G16095 AraportID:AT4G16095 Length:187 Species:Arabidopsis thaliana

Alignment Length:142 Identity:37/143 (26%)
Similarity:63/143 (44%) Gaps:29/143 (20%)


  Fly    65 LRVLHVNSNN---LESIPQAIGSLRQLQHLDL--------NRNLIVNVPEEIKSCKHLT---HLD 115
            ||.|.|:|.:   ||::..::...|:|..|.|        |...:|   .::...|.||   |  
plant    27 LRTLTVHSLDGCTLETLSASLCESRELGQLSLYEVMHDRHNEGKLV---LDLIQLKFLTVGMH-- 86

  Fly   116 LSCNSLQRLPDAITSLISLQELLLNETYLEFLPAN-FGRLVNLRILELR----LNNLMTLPKSMV 175
                 :.||||......:|..:.|....:|..|.. ..:|::|:::||.    ....|.||..::
plant    87 -----MPRLPDQHRFPPNLTNICLRYCCMEDDPMPILEKLLHLKLVELSYGAFTGKKMELPDEVI 146

  Fly   176 RLINLQRLDIGG 187
            .:.:|::|.|||
plant   147 YITSLKQLTIGG 158

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Lap1NP_001188938.1 LRR_RI <21..200 CDD:238064 37/143 (26%)
leucine-rich repeat 21..41 CDD:275380
LRR_8 40..98 CDD:290566 12/44 (27%)
leucine-rich repeat 42..64 CDD:275380
leucine-rich repeat 65..87 CDD:275380 8/25 (32%)
LRR_8 86..140 CDD:290566 16/65 (25%)
leucine-rich repeat 88..110 CDD:275380 6/30 (20%)
leucine-rich repeat 111..133 CDD:275380 7/25 (28%)
leucine-rich repeat 134..156 CDD:275380 5/23 (22%)
LRR_8 156..213 CDD:290566 11/37 (30%)
leucine-rich repeat 157..179 CDD:275380 6/26 (23%)
leucine-rich repeat 180..202 CDD:275380 5/9 (56%)
leucine-rich repeat 203..225 CDD:275380
leucine-rich repeat 226..248 CDD:275380
leucine-rich repeat 272..294 CDD:275380
LRR_8 279..328 CDD:290566
leucine-rich repeat 295..317 CDD:275380
leucine-rich repeat 318..340 CDD:275380
LRR_8 340..396 CDD:290566
leucine-rich repeat 364..386 CDD:275380
PDZ_signaling 770..846 CDD:238492
AT4G16095NP_680706.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D992188at2759
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
11.010

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