Protein Alignment Rpn6 and CSN1a

DIOPT Version :9

• Sequence 1: NP_725412.2
• Gene: Rpn6 / 36638
• FlyBaseID: FBgn0028689
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_609720.1
• Gene: CSN1a / 34857
• FlyBaseID: FBgn0028838
• Length: 364
• Species: Drosophila melanogaster
• Alignment Length: 188
• Identity: 40/188 - (21%)
• Similarity: 68/188 - (36%)
• Gaps: 42/188 - (22%)

  Fly   183 LVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFS 247
            |:.|.:.....:|.|:.:.:|:.........|.      :|...|...:|:.|.. .:.:|:|..
  Fly   183 LIRVSIYMENWWHVLTYIDEAKQYAYGFENLAQ------EVPARLSCVAGLAHLG-LKIYKSAAQ 240

  Fly   248 YFYEAFEGFDSVDSVKALTSLKYMLLCKIMLGQSDDVNQLVSGKLAITYSGRDI--------DAM 304
            ||.....|....|.:.|                .:||. |.:|..|:....|:.        :|.
  Fly   241 YFLSTPYGRYDYDKIVA----------------PEDVT-LYAGLCALATFDRETLQLNAINSEAF 288

  Fly   305 KSVAEASHK--RSLADFQAA--------LKEYKKELAEDVIVQAHLGTLYDTMLEQNL 352
            |...:.|.|  ..||.|.|.        |:|.:..:..||.:..|:..|||.::.:.|
  Fly   289 KPFFQLSPKMWTILAKFYAGEFDACMTLLREIENHVRLDVYLSPHVSALYDLIMARML 346

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn6	NP_725412.2	RPN6	18..438	CDD:227488	40/188 (21%)
		PCI	302..406	CDD:279707	17/61 (28%)
CSN1a	NP_609720.1	RPN7	105..281	CDD:287560	23/121 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910