Protein Alignment Rpn6 and rpn-6.2

DIOPT Version :9

• Sequence 1: NP_725412.2
• Gene: Rpn6 / 36638
• FlyBaseID: FBgn0028689
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_001254972.1
• Gene: rpn-6.2 / 176273
• WormBaseID: WBGene00010309
• Length: 416
• Species: Caenorhabditis elegans
• Alignment Length: 395
• Identity: 163/395 - (41%)
• Similarity: 250/395 - (63%)
• Gaps: 12/395 - (3%)

  Fly    53 AENDEERIRIKEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMD 117
            |::.|..::..|..||.......:|.....:..|::..|.|...:.||:|:||:|.:|:..|.:|
 Worm    20 AKSSEAEVKRCEDLILSYSRQLAKEKDITGIRTLVESIRSFYDLVGKARASKLIRDIVEHALTID 84

  Fly   118 AGTG--------IEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLREL 174
            .|.|        .::.|..:||.||...||.|||:||:||||.||.|...:|.|..|...|.:||
 Worm    85 QGVGPALDHGKKEKIDLLTNCIGWATSNKREFLRRSLQARLIRLYNDIRDFTNAQKLAQDLSKEL 149

  Fly   175 KKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADE 239
            |||:|:.||:||.:.|||:...|:||.||:.||.:|:|..|:.:..|::|.::|:|||:|::|:|
 Worm   150 KKLEDRELLIEVSVEESKSSFNLNNLAKAKTALLTAKTNTNSAFASPQLQASVDMQSGVLYSAEE 214

  Fly   240 RDFKTAFSYFYEAFEGFDSV-DSVKALTSLKYMLLCKIMLGQSDDVNQLVSGKLAITY--SGRDI 301
            ||:||:|||||||||||.|: |.:.|.::||||:||||||.:::.:..|::.|..:.|  |.| |
 Worm   215 RDYKTSFSYFYEAFEGFASIGDKINATSALKYMILCKIMLNETEQLAGLLAAKEIVAYQKSPR-I 278

  Fly   302 DAMKSVAEASHKRSLADFQAALKEYKKELAEDVIVQAHLGTLYDTMLEQNLCRIIEPYSRVQVAH 366
            .|::|:|:|..||||.||..||.|:|.||.||.:|..|...|...|||:.:.|:|||||.:::::
 Worm   279 IAIRSMADAFRKRSLKDFVKALAEHKIELVEDKVVAVHSQNLERNMLEKEISRVIEPYSEIELSY 343

  Fly   367 VAESIQLPMPQVEKKLSQMILDKKFSGILDQGEGVLIVFEETPVDKTYERVLETIQSMGKVVDTL 431
            :|..|.:.:|.||:.:::||||||..|.:||....::|:.:......:.|.|:||:.:.|.||..
 Worm   344 IARVIGMTVPPVERAIARMILDKKLMGSIDQHGDTVVVYPKADAANQFTRSLKTIRELTKTVDVS 408

  Fly   432 YQKAK 436
            |.:.|
 Worm   409 YSRTK 413

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn6	NP_725412.2	RPN6	18..438	CDD:227488	163/395 (41%)
		PCI	302..406	CDD:279707	45/103 (44%)
rpn-6.2	NP_001254972.1	RPN6	14..411	CDD:227488	162/391 (41%)
		PCI	279..382	CDD:279707	44/102 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160159516
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1052430at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_101896
Panther	1	1.100	-	-	O	PTHR10678
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.850