Protein Alignment Rpn6 and rpn-6.2

DIOPT Version :10

• Sequence 1: NP_725412.2
• Gene: Rpn6 / 36638
• FlyBaseID: FBgn0028689
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_001254972.1
• Gene: rpn-6.2 / 176273
• WormBaseID: WBGene00010309
• Length: 416
• Species: Caenorhabditis elegans
• Alignment Length: 395
• Identity: 163/395 - (41%)
• Similarity: 250/395 - (63%)
• Gaps: 12/395 - (3%)

  Fly    53 AENDEERIRIKEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMD 117
            |::.|..::..|..||.......:|.....:..|::..|.|...:.||:|:||:|.:|:..|.:|
 Worm    20 AKSSEAEVKRCEDLILSYSRQLAKEKDITGIRTLVESIRSFYDLVGKARASKLIRDIVEHALTID 84

  Fly   118 AGTG--------IEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLREL 174
            .|.|        .::.|..:||.||...||.|||:||:||||.||.|...:|.|..|...|.:||
 Worm    85 QGVGPALDHGKKEKIDLLTNCIGWATSNKREFLRRSLQARLIRLYNDIRDFTNAQKLAQDLSKEL 149

  Fly   175 KKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADE 239
            |||:|:.||:||.:.|||:...|:||.||:.||.:|:|..|:.:..|::|.::|:|||:|::|:|
 Worm   150 KKLEDRELLIEVSVEESKSSFNLNNLAKAKTALLTAKTNTNSAFASPQLQASVDMQSGVLYSAEE 214

  Fly   240 RDFKTAFSYFYEAFEGFDSV-DSVKALTSLKYMLLCKIMLGQSDDVNQLVSGKLAITY--SGRDI 301
            ||:||:|||||||||||.|: |.:.|.::||||:||||||.:::.:..|::.|..:.|  |.| |
 Worm   215 RDYKTSFSYFYEAFEGFASIGDKINATSALKYMILCKIMLNETEQLAGLLAAKEIVAYQKSPR-I 278

  Fly   302 DAMKSVAEASHKRSLADFQAALKEYKKELAEDVIVQAHLGTLYDTMLEQNLCRIIEPYSRVQVAH 366
            .|::|:|:|..||||.||..||.|:|.||.||.:|..|...|...|||:.:.|:|||||.:::::
 Worm   279 IAIRSMADAFRKRSLKDFVKALAEHKIELVEDKVVAVHSQNLERNMLEKEISRVIEPYSEIELSY 343

  Fly   367 VAESIQLPMPQVEKKLSQMILDKKFSGILDQGEGVLIVFEETPVDKTYERVLETIQSMGKVVDTL 431
            :|..|.:.:|.||:.:::||||||..|.:||....::|:.:......:.|.|:||:.:.|.||..
 Worm   344 IARVIGMTVPPVERAIARMILDKKLMGSIDQHGDTVVVYPKADAANQFTRSLKTIRELTKTVDVS 408

  Fly   432 YQKAK 436
            |.:.|
 Worm   409 YSRTK 413

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn6	NP_725412.2	RPN6	18..438	CDD:227488	163/395 (41%)
rpn-6.2	NP_001254972.1	RPN6	14..411	CDD:227488	162/391 (41%)