DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ttv and FRA8

DIOPT Version :10

Sequence 1:NP_001356963.1 Gene:ttv / 36614 FlyBaseID:FBgn0265974 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_850113.2 Gene:FRA8 / 817357 AraportID:AT2G28110 Length:448 Species:Arabidopsis thaliana


Alignment Length:458 Identity:101/458 - (22%)
Similarity:162/458 - (35%) Gaps:143/458 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SFLGAHDMQELQLLQSNQSKSLDSSKHLVT-RKPDCRMETCFDFTRCYDRFL------------- 105
            ||...||       |.::| |...||||:| .||..........::.:|..|             
plant    34 SFFVDHD-------QDHRS-STSISKHLLTNHKPKLFASRAMFESKIHDHKLGFTSQQPNIKTDV 90

  Fly   106 -----VYIYP-PEPLNSLGAAPPTSANY--------QKILTAIQESRYYTSDPTAACLFVLGI-- 154
                 :|:|. |...|....|.....|:        .|...:: |....|.||..|..|.:.:  
plant    91 FNNLKIYVYDLPSKFNKDWLANDRCTNHLFAAEVALHKAFLSL-EGDVRTEDPYEADFFFVPVYV 154

  Fly   155 ----DTLD-------RDSLSEDYVRNVPSRLARLPYWN--NGRNHII-----FNLYSGTWPDYAE 201
                .|::       ..||..|.::.|.:   :.|:||  :|.:|:.     |.....|..|.| 
plant   155 SCNFSTINGFPAIGHARSLINDAIKLVST---QYPFWNRTSGSDHVFTATHDFGSCFHTMEDRA- 215

  Fly   202 NSLGFDAGEAILAKASMGVLQ-----LRHGF----DVSIPLF------HKQFPLRAGATGTVQSN 251
                ...|..|..:.|: :||     ..|..    :|.||.:      ||            ...
plant   216 ----IADGVPIFLRNSI-ILQTFGVTFNHPCQEVENVVIPPYISPESLHK------------TQK 263

  Fly   252 NFPANKK--YLLAFKGKRYVHGIGSETRNSLFHLHNGRDMVLVTTCRHGKSWRELQDNRCDEDNR 314
            |.|..|:  ..:.|:||..:|   .:..:..|:....|..:          ||..     ..|.|
plant   264 NIPVTKERDIWVFFRGKMELH---PKNISGRFYSKRVRTNI----------WRSY-----GGDRR 310

  Fly   315 EY---DRY-DYETLLQNSTFCLVPRGRRLGSFRFLEALQAGCIPVLLSNAWVLPFESKIDWKQAA 375
            .|   .|: .|::.:..|.|||.|.|....|.|.:|::..||:||::::...|||.|.:.|...:
plant   311 FYLQRQRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFPSTVRWPDIS 375

  Fly   376 IWADERLLLQVPDIVRSIPAERIFALRQQTQVLWERYFGSIEKIVFTTFEIIRERLPDYPVRSSL 440
            :...||.:.::.||                          :|.:..|...:|:..|.|..||.:|
plant   376 LTVAERDVGKLGDI--------------------------LEHVAATNLSVIQRNLEDPSVRRAL 414

  Fly   441 VWN 443
            ::|
plant   415 MFN 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttvNP_001356963.1 Exostosin 102..393 CDD:397245 78/358 (22%)
Glyco_transf_64 477..737 CDD:430488
FRA8NP_850113.2 Exostosin 94..391 CDD:397245 76/362 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.