DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttv and Ext1

DIOPT Version :10

Sequence 1:NP_001356963.1 Gene:ttv / 36614 FlyBaseID:FBgn0265974 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_001124012.1 Gene:Ext1 / 299907 RGDID:1587375 Length:746 Species:Rattus norvegicus


Alignment Length:778 Identity:416/778 - (53%)
Similarity:531/778 - (68%) Gaps:56/778 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAKKRYILVFV--SCAFLAYAYFGGYRLKVSPLRPRRAQHESAKDGGVQPHEQ--LPSFLGAHD 61
            |||||||.::..  ||..|.: ||||.:.:.|....||.:| |.::|..||...  .|.|..|  
  Rat     1 MQAKKRYFILLSAGSCLALLF-YFGGVQFRASRSHSRREEH-SGRNGLHQPSPDHFWPRFPDA-- 61

  Fly    62 MQELQ-LLQSNQSKSLDSSKHLVTR-KPD----------CRMETCFDFTRC-YDRFLVYIYPPEP 113
               |: ....:|.::.|||.|:..| |.|          ||||:|||||.| .:.|.||:||.:.
  Rat    62 ---LRPFFPWDQLENEDSSVHISPRQKRDANSSIYKGKKCRMESCFDFTLCKKNGFKVYVYPQQK 123

  Fly   114 LNSLGAAPPTSANYQKILTAIQESRYYTSDPTAACLFVLGIDTLDRDSLSEDYVRNVPSRLARLP 178
            ...:      :.:||.||.||:.||:|||||:.||||||.:||||||.||..||.|:.|::..|.
  Rat   124 GEKI------AESYQNILAAIEGSRFYTSDPSQACLFVLSLDTLDRDQLSPQYVHNLRSKVQSLH 182

  Fly   179 YWNNGRNHIIFNLYSGTWPDYAENSLGFDAGEAILAKASMGVLQLRHGFDVSIPLFHKQFPLRAG 243
            .|||||||:||||||||||||.|: :|||.|:|:|||||:.....|..||||||||.|..|...|
  Rat   183 LWNNGRNHLIFNLYSGTWPDYTED-VGFDIGQAMLAKASISTENFRPNFDVSIPLFSKDHPRTGG 246

  Fly   244 ATGTVQSNNFPANKKYLLAFKGKRYVHGIGSETRNSLFHLHNGRDMVLVTTCRHGKSWRELQDNR 308
            ..|.::.|..|..:||:|.||||||:.||||:|||:|:|:|||.|::|:|||:|||.|::.:|:|
  Rat   247 ERGFLKFNTIPPLRKYMLVFKGKRYLTGIGSDTRNALYHVHNGEDVLLLTTCKHGKDWQKHKDSR 311

  Fly   309 CDEDNREYDRYDYETLLQNSTFCLVPRGRRLGSFRFLEALQAGCIPVLLSNAWVLPFESKIDWKQ 373
            ||.||.||::|||..:|.|:||||||||||||||||||||||.|:||:|||.|.|||...|:|.|
  Rat   312 CDRDNTEYEKYDYREMLHNATFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEVINWNQ 376

  Fly   374 AAIWADERLLLQVPDIVRSIPAERIFALRQQTQVLWERYFGSIEKIVFTTFEIIRERLPDYPVRS 438
            ||:..|||||||:|..:|||..::|.|||||||.|||.||.|:||||.||.|||::|:..:..|:
  Rat   377 AAVIGDERLLLQIPSTIRSIHQDKILALRQQTQFLWEAYFSSVEKIVLTTLEIIQDRIFKHISRN 441

  Fly   439 SLVWNSSPGALLTLPTFADSSRYMPFLLNSMGAEPRHNYTAVIYVQIGAALGPNAALYKLVRTIT 503
            ||:||..||.|..||.::......|:...::|.:|...:||||:. :...:..:..:.||:....
  Rat   442 SLIWNKHPGGLFVLPQYSSYLGDFPYYYANLGLKPPSKFTAVIHA-VTPLVSQSQPVLKLLVAAA 505

  Fly   504 KSQFVERILVLWAADRPLPLKKRWPPTSHIPLHVISLGGSTRSQGAGPTSQTTEGRPSI-SQRFL 567
            |||:..:|:|||..|:|||.|.|||.|: :|:.||                  ||...: |.|||
  Rat   506 KSQYCAQIIVLWNCDKPLPAKHRWPATA-VPVIVI------------------EGESKVMSSRFL 551

  Fly   568 PYDEIQTDAVLSLDEDAILNTDELDFAYTVWRDFPERIVGYPARAHFWDDSKNAWGYTSKWTNYY 632
            |||.|.||||||||||.:|:|.|:|||:|||:.|||||||||||:||||:||..|||||||||.|
  Rat   552 PYDNIITDAVLSLDEDTVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDNSKERWGYTSKWTNDY 616

  Fly   633 SIVLTGAAFYHRYYNYLYTNWLSLLLLKTVQQSSNCEDILMNLLVSHVTRKPPIKVTQRKGYKDR 697
            |:||||||.||:||:|||:::|...|...|.|.:||||||||.|||.||:.|||||||:|.||:.
  Rat   617 SMVLTGAAIYHKYYHYLYSHYLPASLKNMVDQLANCEDILMNFLVSAVTKLPPIKVTQKKQYKET 681

  Fly   698 ETGR----SPWNDPDHFIQRQSCLNTFAAVFGYMPLIRSNLRMDPMLYRDPVSNLRKKYRQIE 756
            ..|:    |.|.|||||.|||||:||||:.|||||||.|.:|:||:|::|.||.||||||.||
  Rat   682 MMGQTSRASRWADPDHFAQRQSCMNTFASWFGYMPLIHSQMRLDPVLFKDQVSILRKKYRDIE 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttvNP_001356963.1 Exostosin 102..393 CDD:397245 171/290 (59%)
Glyco_transf_64 477..737 CDD:430488 148/264 (56%)
Ext1NP_001124012.1 Exostosin 110..396 CDD:397245 171/292 (59%)
Glyco_transf_64 480..725 CDD:430488 148/264 (56%)

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