DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and ABCB26

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_177218.3 Gene:ABCB26 / 843398 AraportID:AT1G70610 Length:700 Species:Arabidopsis thaliana


Alignment Length:597 Identity:193/597 - (32%)
Similarity:299/597 - (50%) Gaps:105/597 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 AISTLLLDKVRQ-----------FSLQNTYIGII-----MLV--------CSYLSITCFNYAAHS 174
            |.|||::..:.:           ||.|:..|.:.     :||        ||.:....|..|...
plant   142 AFSTLIVAALSEITIPHFLTASIFSAQSGDIAVFHRNVKLLVTLCVTSGICSGIRGCFFGIANMI 206

  Fly   175 QILTIRSKFFRSILHQDMKWYDFNQSGEVASRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLA 239
            .:..:|...:.::|.||:.::|....|::.||:..|..::...:...:.|....::...|:|:..
plant   207 LVKRMRETLYSTLLFQDISFFDSQTVGDLTSRLGSDCQQVSRVIGNDLNMIFRNVLQGTGALIYL 271

  Fly   240 FVKGWQLSL----VCLTSLPLTFIAMGLVAVATSRLAKKEVTMYAGAAVVAEGALSGIRTVKAFE 300
            .:..|.|.|    :|.....:.|: .|:....|::|. :|:|  |.|..||:...|.:|||:.:.
plant   272 LILSWPLGLCTLVICCILAAVMFV-YGMYQKKTAKLI-QEIT--ASANEVAQETYSLMRTVRVYG 332

  Fly   301 GEAKEVAAYKERVVAAKILNIKRNMFSGIGFGLLWFFIYASYALAFWYGVGLVIKGYHEPAYENY 365
            .|.:|...|...:.....::::::               |:|.:..|....|    ||       
plant   333 TEKQEFKRYNHWLQRLADISLRQS---------------AAYGIWNWSFNTL----YH------- 371

  Fly   366 DAGTMITVFFSVMMGSMNIGMAAPYIEAFGIAK--------------------------GACAKV 404
                 .|...:|::|.::|  .|..|.|..:.|                          ||..||
plant   372 -----ATQIIAVLVGGLSI--LAGQITAEQLTKFLLYSEWLIYATWWVGDNLSSLMQSVGASEKV 429

  Fly   405 FHIIEQIPEINPID---GEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVG 466
            |    |:.::.|.|   .:|.:|......|||.:|.|.||:|.||:::..:|:.:|.|:.||:||
plant   430 F----QMMDLKPSDQFISKGTRLQRLTGHIEFVDVSFSYPSRDEVAVVQNVNISVHPGEVVAIVG 490

  Fly   467 PSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFATSIYENIRYGR 531
            .||.||||.:.|:.:.|:|.:|.:|.:|..||:||:.|||.|||.|||||.||.|.|..||:||.
plant   491 LSGSGKSTLVNLLLQLYEPTSGQILLDGVPLKELDVKWLRQRIGYVGQEPKLFRTDISSNIKYGC 555

  Fly   532 E-DATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDE 595
            : :.::|:|.:||..|.|..||..||.||:|:|.:  ..||||||||||||||::|||.||:|||
plant   556 DRNISQEDIISAAKQAYAHDFITALPNGYNTIVDD--DLLSGGQKQRIAIARAILRDPRILILDE 618

  Fly   596 ATSALDTASEAKVQAALEKV----SAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELME 656
            ||||||..||..|:..|..:    :..|:.|::||||||::.|||||.::.|.|||.|:|:||:.
plant   619 ATSALDAESEHNVKGVLRSIGNDSATKRSVIVIAHRLSTIQAADRIVAMDSGRVVEMGSHKELLS 683

  Fly   657 LKDHYFNLVTTQ 668
            ....|..|...|
plant   684 KDGLYARLTKRQ 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 193/597 (32%)
ABCB26NP_177218.3 MdlB 122..695 CDD:440747 192/595 (32%)

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