DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and ABCI17

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_176961.1 Gene:ABCI17 / 843122 AraportID:AT1G67940 Length:263 Species:Arabidopsis thaliana


Alignment Length:229 Identity:79/229 - (34%)
Similarity:129/229 - (56%) Gaps:30/229 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 ILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVV 512
            ||..:.:.|.:|..|.::||||.||||.::.:.|.::|....:..:|.::.::|:..||.|:|::
plant    44 ILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVIALRRRVGML 108

  Fly   513 GQEPILFATSIYENIRYG----REDATREEIEAAAAAANA-AIFIKKLPKGYDTLVGERGAQLSG 572
            .|.|:||..::.:|:|||    .|..:.||:....:.|:. |.|.||           .||:||.
plant   109 FQLPVLFQGTVADNVRYGPNLRGEKLSDEEVYKLLSLADLDASFAKK-----------TGAELSV 162

  Fly   573 GQKQRIAIARALIRDPEILLLDEATSALDTASEAKVQAALEKV--SAGRTTIIVAHRLSTVRR-A 634
            ||.||:|:||.|..:||:|||||.|||||..|...::..:.|:  ..|.||:||:|.:..::: |
plant   163 GQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKQRGITTVIVSHSIKQIQKVA 227

  Fly   635 DRIVVINKGEVVE--------SGTH---QELMEL 657
            |.:.::..||:||        ..||   |..::|
plant   228 DIVCLVVDGEIVEVLKPSELSHATHPMAQRFLQL 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 79/229 (34%)
ABCI17NP_176961.1 ABC_PstB_phosphate_transporter 29..247 CDD:213227 75/213 (35%)

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