DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and ABCI11

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_196914.1 Gene:ABCI11 / 831259 AraportID:AT5G14100 Length:278 Species:Arabidopsis thaliana


Alignment Length:210 Identity:57/210 - (27%)
Similarity:107/210 - (50%) Gaps:20/210 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   431 IEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLF--- 492
            ||.::|.:: |...:::|||.:|..:.......:.|.||.||:|.:||:.....|.:|::..   
plant    51 IEVRDVCYR-PPGTQLNILNGVNFSLREKSFGLIFGKSGSGKTTLLQLLAGLNKPTSGSICIQGY 114

  Fly   493 --NGTNLKDLDINWLRSRIGVVGQEPILF--ATSIYENIRYG--REDAT---REEIEAAAAAANA 548
              :|....|.|: ....::|:|.|.|..|  |.::.:.|.:|  |:..:   :|::.:....|..
plant   115 GDDGQPKADPDL-LPTEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSNLQRAFN 178

  Fly   549 AIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDEATSALDTASEAKVQAALE 613
            .:.:..:|...|..:      ||||.|:|:|:|..|::.|::|:|||..:.||..:.|.|...|:
plant   179 WVGLDSIPLDKDPQL------LSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVAKLLK 237

  Fly   614 KVSAGRTTIIVAHRL 628
            .:....|.::|:|.|
plant   238 HLKKELTLLVVSHDL 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 57/210 (27%)
ABCI11NP_196914.1 ABC_cobalt_CbiO_domain1 52..268 CDD:213192 56/209 (27%)

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