DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr50 and ABCI10

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_195072.2 Gene:ABCI10 / 829483 AraportID:AT4G33460 Length:271 Species:Arabidopsis thaliana


Alignment Length:256 Identity:72/256 - (28%)
Similarity:117/256 - (45%) Gaps:33/256 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1047 LRRQPSIVDRPGVSRDPWHSEGYVRFDKVKFSYPTRSEIQV--LKGLELAVSKGQKIALVGPSGC 1109
            ||...|.|...|..|..:.....|....:.||..||..|.|  |:.....:..||...::||:||
plant    17 LRSISSSVSPSGSYRIKFSDNVAVECRNLCFSVSTRQGISVPILRDCSFRIPSGQLWMILGPNGC 81

  Fly  1110 GKSTCIQLIQRFYDVDEGATLIDECDVRNVSMTNLRNQLGIVSQEPILFDRTIRENISYGDNARN 1174
            ||||.::::....:...|...:::  .:|....|..:|:.:         .|:..::::|....:
plant    82 GKSTLLKILAGVVNPSSGTVFVEK--PKNFVFQNPDHQVVM---------PTVEADVAFGLGKYH 135

  Fly  1175 VTDQE-----IISACKKSNIHEFIANLPLGYDTRMGEKGAQLSGGQKQRIAIARALIRNPKIMLL 1234
            ..:||     :|.|.:...:.:::.. |:          ..||||||||||||.||....|::||
plant   136 DMNQEEVKSRVIKALEAVGMRDYMQR-PI----------QTLSGGQKQRIAIAGALAEACKVLLL 189

  Fly  1235 DEATSALDAESE----KVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFENGLVCEAGD 1291
            ||.|:.||...:    |.|:|.::|.....|.:.:.|||..:.::|.....|||.|...||
plant   190 DELTTFLDESDQMGVIKAVKDLINAKKGDVTALWVTHRLEELKYADGAVYMENGRVVRHGD 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 72/256 (28%)
ABCI10NP_195072.2 ABC_cobalt_CbiO_domain1 41..244 CDD:213192 61/224 (27%)

Return to query results.
Submit another query.