DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and abcb9

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:NP_001119906.1 Gene:abcb9 / 570148 ZFINID:ZDB-GENE-050517-12 Length:789 Species:Danio rerio


Alignment Length:705 Identity:242/705 - (34%)
Similarity:359/705 - (50%) Gaps:97/705 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EDSDR--DRKSFEPNKSKKKSK-HDESDASDEEDGSQYHEDVKQVSYFQLFRYATKKDRALYVIG 91
            ||::|  |....|..||.|..| |..|.|                :..:|..|. |||.:|..|.
Zfish   151 EDTERLVDETEDESEKSMKSGKEHTHSGA----------------TIGRLLSYC-KKDSSLLSIA 198

  Fly    92 ----LLSAVATGLTTPANSLIFGNLANDMIDLGGLLESGKSYRADDAISTLLLDK-VRQFSLQNT 151
                |||||.                          |:...|....||..:::.| :..|:....
Zfish   199 FFFLLLSAVC--------------------------EAFIPYYTGQAIDGIVIQKSMDHFAKPMI 237

  Fly   152 YIGIIMLVCS--------YLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFNQSGEVASRMN 208
            .:.::.||.|        ..|:|   :|..:  :.:|:..|||::||::.::|.|.:|::.||:.
Zfish   238 TLSVLALVSSIAIGFRGGVFSVT---FARLN--IRLRNLLFRSLMHQEIGFFDANHTGDITSRLT 297

  Fly   209 EDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVATSRLAK 273
            .|.:::.|.:::.|.:|:...|..||..:..|...|:||:|.:...|...:...|......:|.|
Zfish   298 SDTTQVSDLISQNVNLFLRSFVKAVGIFIFMFGMSWKLSVVTIMGFPYIAVVSKLYGEYYKKLTK 362

  Fly   274 KEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGFGLLWFFI 338
            :..|..|.|..|||..:|.:|||::|..|.:|...|..|:....:||.|:    .|.:..   |:
Zfish   363 EVQTALAQANKVAEETISAMRTVRSFANEDQEGDMYYSRLQEMFVLNKKQ----AIAYAC---FM 420

  Fly   339 YASYALAFWYGVGLVIKGYHEPAYENYDAGTMIT-VFFSVMMGSMNIGMAAPYIEAFGIAK--GA 400
            ::||.......|.::..|.|.........||:|: |.:.:.:|.....:::.|.   |:.:  ||
Zfish   421 WSSYISELALQVAILFYGGHLVVTNQMSGGTLISFVIYELELGEALESISSVYT---GLMQGVGA 482

  Fly   401 CAKVFHIIEQIPE--INPIDGEGKKLNEPLT-TIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTV 462
            ..|||..|::.|:  :|     |::..|.|. .:||..|.|.||:|||:.:|..::..:..||..
Zfish   483 AEKVFEYIDRKPKHALN-----GQEAPETLEGQVEFNNVTFAYPSRPEMDVLKNVSFSLRPGQVT 542

  Fly   463 ALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFATSIYENI 527
            |||||||.|||:|:.|::.||.||.|.:|.:|..:......:..|::.:|.|||:|||.::..||
Zfish   543 ALVGPSGGGKSSCVCLLENFYAPQQGQVLVDGRPVNTYQHKYYHSKVALVAQEPVLFARTVQMNI 607

  Fly   528 RYGREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILL 592
            .||..:|..|.:..||..|||..||..|.||||:.|||:|.|||||||||:||||||||.|.||:
Zfish   608 SYGVPEAPMEAVIRAAINANAHDFITGLSKGYDSGVGEKGTQLSGGQKQRVAIARALIRSPRILI 672

  Fly   593 LDEATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELMEL 657
            |||||||||:.||..||.||..:....|.:::|||||||.|||.|:||:||.|||.|.|.|||..
Zfish   673 LDEATSALDSESEYIVQQALNNLMREHTVLVIAHRLSTVERADNILVIDKGSVVEQGPHAELMAR 737

  Fly   658 KDHYFNLVTTQ-LG-----EDDGSVLSPTGDIYKNFDIKDEDEEEIKVLSEDEDE 706
            ...|..||..| ||     :|.....:||      :::|.||:|..:..|:.|.|
Zfish   738 GGLYCKLVQRQILGTEIDVDDKNPSPAPT------WELKTEDKENAEDCSDTEYE 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 230/663 (35%)
abcb9NP_001119906.1 3a01208 46..745 CDD:273363 227/656 (35%)

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