DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mdr50 and tap2t

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:XP_005156356.1 Gene:tap2t / 556826 ZFINID:ZDB-GENE-130531-48 Length:728 Species:Danio rerio


Alignment Length:610 Identity:189/610 - (30%)
Similarity:308/610 - (50%) Gaps:78/610 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 GGLLESGKSYRADDAISTLLLDKVRQFSLQNTYIG------------------------------ 154
            ||..:.|::.:.|:....||:..:|...|...|:|                              
Zfish   134 GGSSKGGRNQKKDEEARALLMRVIRYSRLDYLYLGAAFIFLSLAALFETFIPYCTGKVIDILSGK 198

  Fly   155 ----------IIMLVCSY-------LSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFNQSGE 202
                      :::.:||.       |....|.::.:.....||:..|::::.|::.::|..:.|.
Zfish   199 YQHSNFTWAILLLALCSLGSSMFSGLRGGMFMFSLNRLNKRIRNLLFQNVMKQEIDFFDEIKPGN 263

  Fly   203 VASRMNEDLSKMEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVA 267
            :|||:..|..||...:|..|.:.:..:|...|.|.......|||:|:....:||...........
Zfish   264 LASRLISDTDKMGRAVAMNVNVLLRSMVKTCGMLYFMLGVSWQLTLLTCIEMPLLAFLQNSYNSL 328

  Fly   268 TSRLAKKEVTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGFG 332
            :.:.:|:.....|....:|...:..|:||::|:.|.:|...| |:.:..|:..::|..|....:.
Zfish   329 SQKTSKELQDCNAETGELASSVIGSIKTVRSFKAECQEQQRY-EQTINRKLQVLRRKGFYSAVYL 392

  Fly   333 LLWFFIYASYALA-FWYGVGLVIKGYHEPAYENYDAGTMIT-VFFSV-MMGSMNIGMAAPYIEAF 394
            |:..||.....:| ...|..|:..|       ...:|:::. ||:.. |:.||.     ..:..:
Zfish   393 LIRRFITVGLKVAMLCQGRNLISSG-------QLSSGSLLAFVFYQKDMVTSMK-----HLVYIY 445

  Fly   395 G---IAKGACAKVFHIIEQIPEINPI-DGEGKKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLK 455
            |   ...|:..|||.::::.|::... |...:||...:|   |::|.|.|.:||:.:.|..:.|:
Zfish   446 GDMLSTVGSSVKVFQLLDRKPQMREAGDLAPEKLKGRIT---FEKVTFSYLSRPDDTALKSVTLE 507

  Fly   456 IHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFA 520
            :..|:..|||||||.|||:|:.|:||||:|:.|.:..:|..|......:|..::.||.|:|:||:
Zfish   508 LSPGKLTALVGPSGGGKSSCVSLLQRFYEPKEGEMFLDGEPLYHYQHQYLHKKVAVVSQDPVLFS 572

  Fly   521 TSIYENIRYGREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALI 585
            .|:..||.||.:|.|.|.||.||..|||..||..|.:||||.|||.|.|||.||||.||||||||
Zfish   573 GSVRYNIEYGLQDCTLERIEEAARKANAHNFICNLEQGYDTDVGECGGQLSAGQKQCIAIARALI 637

  Fly   586 RDPEILLLDEATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGT 650
            |:|:||:||||||.:|::::..:|..|..:: .:|.:::||||.|:.:||.|:.:..|||.|.||
Zfish   638 RNPQILILDEATSHMDSSTQQAIQDVLNSIT-DQTVLVIAHRLETIEKADHIIFMEGGEVKEQGT 701

  Fly   651 HQELME-------LKDHYFNLVTTQ 668
            ||:||:       |::..|||.|.|
Zfish   702 HQQLMDKQGRYHRLREKLFNLETQQ 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 189/610 (31%)
tap2tXP_005156356.1 3a01208 28..715 CDD:273363 183/597 (31%)

Return to query results.
Submit another query.