DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr50 and tap1

DIOPT Version :10

Sequence 1:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster
Sequence 2:XP_002665053.1 Gene:tap1 / 100333043 ZFINID:ZDB-GENE-050517-43 Length:731 Species:Danio rerio


Alignment Length:541 Identity:185/541 - (34%)
Similarity:292/541 - (53%) Gaps:55/541 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 TYIGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFNQSGEVASRMNEDLSKME 215
            |.:.|:..||.::....:|........:|:...|:::|.||:.::|...:|::.||:..|.:.|.
Zfish   207 TLMTIMSAVCEFVCDLIYNITMSRIHTSIQGLVFQAVLKQDIAFFDKATTGDIVSRITTDTNTMS 271

  Fly   216 DGLAEKVVMFVHYLVAFV---GSLVLAFVKGWQLSLVCLT--SLPLTFIAMGLVAVATSRLAKKE 275
            :.|:||:.:.:.|.:..:   ||:::...:     |.|.|  .||:.:|...:......:|:.:.
Zfish   272 ESLSEKLSLLMWYFMRVIFLFGSMLMLSTR-----LCCFTLLGLPVIWIIPEIFGRFYQKLSAQV 331

  Fly   276 VTMYAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGFGLLWFFIYA 340
            ....|.|..||....|.::||::|..|..|...|::.:.....||...               .|
Zfish   332 QDSLAKANEVATETFSSMKTVRSFANEDGETERYRKCLEDTFALNKVE---------------AA 381

  Fly   341 SYALAFW---------------YGVGLVIKGYHEPAYENYDAGTMITVFFSVMMGSMNIGMAAPY 390
            :||::.|               || |.::.|      .:..:|.:::.....:..:..:.:...|
Zfish   382 AYAVSTWTNSMSSLALKVSILYYG-GRLVTG------SDVSSGDLVSFVLYELQFTSAVEVLMSY 439

  Fly   391 IEAFGIAKGACAKVFHIIEQIPEINPIDGEGKKLNEPLTT---IEFKEVEFQYPTRPEVSILNKL 452
            ......|.||..|:|..:::.|::.| ||.    ..|.|.   ::|:.|.|.||.||:..:|..:
Zfish   440 WPHVKKAVGASEKIFEYVDRKPDVPP-DGS----LAPKTLKGHVQFRNVTFAYPKRPDTDVLKNV 499

  Fly   453 NLKIHRGQTVALVGPSGCGKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPI 517
            :|::..|:..|||||||.||:|.:.|::|||.||.|.:|.:...|......:|..:|.||.|||:
Zfish   500 SLELKAGKITALVGPSGSGKTTVVSLLERFYQPQNGEILLDQKPLLSYKDQYLHEKISVVSQEPV 564

  Fly   518 LFATSIYENIRYGREDATREEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIAR 582
            |||.|:.|||:||:|:||.|||.|||..|||..||..|||||||..||:|.|:||||||||||||
Zfish   565 LFARSVRENIKYGKENATNEEIYAAARLANAHDFISSLPKGYDTDAGEKGGQVSGGQKQRIAIAR 629

  Fly   583 ALIRDPEILLLDEATSALDTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVE 647
            |||:.|:||:||:|||:|||.||.:|.:||:|.....|.::::||||.|..||.|:.:.:||:||
Zfish   630 ALIQKPQILVLDDATSSLDTESEHRVYSALKKELQSCTVLLISHRLSGVENADHILFLREGELVE 694

  Fly   648 SGTHQELMELKDHYFNLVTTQ 668
            .|.||:|::.:..|...|..|
Zfish   695 EGNHQQLLDKQGFYAEFVKQQ 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 185/541 (34%)
tap1XP_002665053.1 3a01208 42..712 CDD:273363 183/536 (34%)

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