DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Opa1 and DL1

DIOPT Version :10

Sequence 1:NP_725369.1 Gene:Opa1 / 36578 FlyBaseID:FBgn0261276 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_851120.1 Gene:DL1 / 834213 AraportID:AT5G42080 Length:610 Species:Arabidopsis thaliana


Alignment Length:666 Identity:150/666 - (22%)
Similarity:266/666 - (39%) Gaps:181/666 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 TMADHLPRVVVVGDQSSGKTSVLESIAKARIFPRGSGEMMTRAPVKVTLA---EGPYHVAQFRDS 355
            |:.|.||.:.|||.|||||:||||||......||||| ::||.|:.:.|.   :|....|:|...
plant    29 TLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSG-IVTRRPLVLQLQKIDDGTREYAEFLHL 92

  Fly   356 DREYDLTKESDLQDLRRDVEFRMKASVRGGKTVSNEVIAMTVKGPGLQRMVLVDLPGIISTMTVD 420
            .|:    |.:|...:|::::..........|.:|:..|.:::..|.:..:.|:|||| ::.:.||
plant    93 PRK----KFTDFAAVRKEIQDETDRETGRSKAISSVPIHLSIYSPNVVNLTLIDLPG-LTKVAVD 152

  Fly   421 MASDT--KDSIHQMTKHYMSNPNAIILCIQDGSVDAERSNVTDLVMQCDPLGRRTIFVLTKVDLA 483
            ..||:  || |..|.:.|:..||.|||.|...:.|...|:...:..:.||.|.||..||||:||.
plant   153 GQSDSIVKD-IENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSGDRTFGVLTKIDLM 216

  Fly   484 EELADPDRIRKILSGKLFPMKALGY-YAVVTGRGRKD--DSID--AIRQYEEDFFKNSKLFHRRG 543
            ::..|   ..:||.|:.|.:|   | :..|..|.:.|  .::|  |.|:.|.::|.|:..:..  
plant   217 DKGTD---AVEILEGRSFKLK---YPWVGVVNRSQADINKNVDMIAARKREREYFSNTTEYRH-- 273

  Fly   544 VIMPHQVTSRNLSLAVSDRFWKMVRETIEQQADAFKATRFNLETEWKNNFPRLRESGRDELFDKA 608
              :.:::.|.:|:..:|....::::..|.........|...||||       |...|:....| |
plant   274 --LANKMGSEHLAKMLSKHLERVIKSRIPGIQSLINKTVLELETE-------LSRLGKPIAAD-A 328

  Fly   609 KGEILDEVVTLSQISAKKWDDALSTKLWEKLSNYVFESIYLPAAQSGSQNSFNTMVDIKLRQWAE 673
            .|::    .::.:|.              :|.:.:|:. :|...::|.:..:|..         :
plant   329 GGKL----YSIMEIC--------------RLFDQIFKE-HLDGVRAGGEKVYNVF---------D 365

  Fly   674 QALPAKSVEAGWEALQQEFISLMERSKKAQDHDGIFDQLKSAVVDEAIRRHSWEDK-AIDMLR-- 735
            ..|||                                         |::|..::.: |:|.:|  
plant   366 NQLPA-----------------------------------------ALKRLQFDKQLAMDNIRKL 389

  Fly   736 VIQLNTLEDRFVHDKQEWDSAVKFLESSVNAKLVQTEETLAQMFGPGQMRRITHWQYLTQDQQKR 800
            |.:.:..:...:..:|.:.   :.:|||:           ..:.||.:                 
plant   390 VTEADGYQPHLIAPEQGYR---RLIESSI-----------VSIRGPAE----------------- 423

  Fly   801 RSVKNELDKILKNDTKHLPTLTHDELTTVRKNLQRDNVDVDTDYIRQTWFPVYRKHFLQQALQRA 865
            .||          ||.|          .:.|:|...:|: :|..::|  :|..|......|::..
plant   424 ASV----------DTVH----------AILKDLVHKSVN-ETVELKQ--YPALRVEVTNAAIESL 465

  Fly   866 KDCRKAYYLYTQQGAECEISCSDVVLFWRIQQVIKITGNALRQQVINREARRLDKEIKAVLDEFS 930
            ...|:.....|.|..:.|.|...|..|.::.|.::..||...                ::.|.::
plant   466 DKMREGSKKATLQLVDMECSYLTVDFFRKLPQDVEKGGNPTH----------------SIFDRYN 514

  Fly   931 DDEEKKGYLLTGKRVL 946
            |...::    .|..||
plant   515 DSYLRR----IGSNVL 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Opa1NP_725369.1 DLP_1 298..572 CDD:206738 88/283 (31%)
OPA1_C 629..972 CDD:466080 48/321 (15%)
DL1NP_851120.1 DLP_1 33..300 CDD:206738 88/283 (31%)
Dynamin_M 221..495 CDD:460033 71/414 (17%)
GED 513..606 CDD:128597 4/18 (22%)

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