DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Opa1 and Dnm3

DIOPT Version :10

Sequence 1:NP_725369.1 Gene:Opa1 / 36578 FlyBaseID:FBgn0261276 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_612547.1 Gene:Dnm3 / 171574 RGDID:727949 Length:869 Species:Rattus norvegicus


Alignment Length:792 Identity:175/792 - (22%)
Similarity:310/792 - (39%) Gaps:155/792 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 KSLIDMYSEVLDELSGYDTGYTMADHLPRVVVVGDQSSGKTSVLESIAKARIFPRGSGEMMTRAP 337
            :.||.:.:.:.|..|.  .|.:....||::.|||.||:||:||||:.......||||| ::||.|
  Rat     7 EELIPLVNRLQDAFSA--LGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSG-IVTRRP 68

  Fly   338 VKVTLAEGPYHVAQFRDSDREYDLTKESDLQDLRRDVEFRMKASVRGGKTVSNEVIAMTVKGPGL 402
            :.:.|.......|:|.....:    |.:|..::|.::|..........|.:|:..|.:.|..|.:
  Rat    69 LVLQLVTSKAEYAEFLHCKGK----KFTDFDEVRHEIEAETDRVTGMNKGISSVPINLRVYSPHV 129

  Fly   403 QRMVLVDLPGIISTMTVDMASDTKDSIHQMTKHYMSNPNAIILCIQDGSVDAERSNVTDLVMQCD 467
            ..:.|:|||||......|...|.:..|..|...:::..|.:||.:...:.|...|:...|..:.|
  Rat   130 LNLTLIDLPGITKVPVGDQPPDIEYQIRDMIMQFITRENCLILAVTPANTDLANSDALKLAKEVD 194

  Fly   468 PLGRRTIFVLTKVDLAEELADPDRIRKILSGKLFPMKALGYYAVVTGRGRKD----DSIDAIRQY 528
            |.|.|||.|:||:||.:|..|   .|.:|..||.|::. ||..|| .|.:||    ..|.|....
  Rat   195 PQGLRTIGVITKLDLMDEGTD---ARDVLENKLLPLRR-GYVGVV-NRSQKDIDGKKDIKAAMLA 254

  Fly   529 EEDFFKNSKLFH----RRGVIMPHQVTSRNLSLAVSDRFWKMVRET--------------IEQQA 575
            |..||.:...:.    |.|.  ||      |...::.:....:|:|              ||.:.
  Rat   255 ERKFFLSHPAYRHIADRMGT--PH------LQKVLNQQLTNHIRDTLPNFRNKLQGQLLSIEHEV 311

  Fly   576 DAFK------ATR-----FNLETEWKNNFPRLRESGRD-----ELFDKAK-GEILDEVVTLSQIS 623
            :|||      .||     ..:..::..:|.:..|...|     ||...|| ..|..|......:.
  Rat   312 EAFKNFKPEDPTRKTKALLQMVQQFAVDFEKRIEGSGDQVDTLELSGGAKINRIFHERFPFEIVK 376

  Fly   624 AKKWDDALSTKLWEKLSNYVFESIYLPAAQSG---SQNSFNTMVDIKLRQWAEQALPAKSVEAGW 685
            .:..:..|..::     :|..::|:  ..::|   ...:|..:|..::.:....:|  |||    
  Rat   377 MEFNEKELRREI-----SYAIKNIH--GIRTGLFTPDMAFEAIVKKQIVKLKGPSL--KSV---- 428

  Fly   686 EALQQEFISLMER-SKKAQDHDGIFDQLKSAVVDEAIRRHSWEDKAIDM------LRVIQLNTLE 743
            :.:.||.|:.::: :|:..:...:.::.:..|.:....|   |.|..|.      ::|..:||..
  Rat   429 DLVMQELINTVKKCTKRLANFPRLCEETERIVANHIRER---EGKTKDQVLLLIDIQVSYINTNH 490

  Fly   744 DRF------------VHDKQEWDSAVKFLESS---VNAKLVQTEETLAQMFGPGQMRRITHWQYL 793
            :.|            ||.|....:....|..|   |..|...|...:..|.|..:    .:|..|
  Rat   491 EDFIGFANAQQRSSQVHKKSTIGNQGTNLPPSRQIVIRKGWLTVSNIGIMKGGSK----GYWFVL 551

  Fly   794 T--------QDQQKRRSVKNELDKILKND-------TKHLPTLTHDELTTVRKNLQRDNVDVDTD 843
            |        .|::|.:.....||.:...|       :||:..|.:.|...|.|:.:...:..|:.
  Rat   552 TAESLSWYKDDEEKEKKYMLPLDNLKVRDVEKGFMSSKHVFALFNTEQRNVYKDYRSLELACDSQ 616

  Fly   844 YIRQTWFPVYRKHFLQQALQRAKDCRKAYYLYTQQGAECEISCSDVVLFWRIQQV-------IKI 901
            ....:|         :.:|.||.......:....:..:.|....|..|..:::.:       :.|
  Rat   617 EDVDSW---------KASLLRAGVYPDKSFTENDENGQAENFSMDPQLERQVETIRNLVDSYMSI 672

  Fly   902 TGNALRQQV--------INREARRLDKEIKAVLDEFSDDEEKKGYLLTGKRVLLAEELIKVRQIQ 958
            ....:|..:        ||.....::.|:.|.|  :|.:::.          .|.||.::..|.:
  Rat   673 INKCIRDLIPKTIMHLMINNVKDFINSELLAQL--YSSEDQN----------TLMEESVEQAQRR 725

  Fly   959 EKLEEFINSLNQ 970
            :::.....:|.:
  Rat   726 DEMLRMYQALKE 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Opa1NP_725369.1 DLP_1 298..572 CDD:206738 86/295 (29%)
OPA1_C 629..972 CDD:466080 68/397 (17%)
Dnm3NP_612547.1 DYNc 6..245 CDD:197491 79/249 (32%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 38..45 4/6 (67%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 64..66 0/1 (0%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 136..139 2/2 (100%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 205..208 2/2 (100%)
Dynamin_M 215..502 CDD:460033 64/315 (20%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 235..238 1/3 (33%)
PH_dynamin 526..635 CDD:269958 24/121 (20%)
GED 655..745 CDD:460495 14/95 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 752..869
MISS <753..841 CDD:318115
Blue background indicates that the domain is not in the aligned region.

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