DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS16 and mrps16

DIOPT Version :10

Sequence 1:NP_523737.1 Gene:mRpS16 / 36570 FlyBaseID:FBgn0033907 Length:129 Species:Drosophila melanogaster
Sequence 2:NP_001006030.1 Gene:mrps16 / 450009 ZFINID:ZDB-GENE-041010-123 Length:129 Species:Danio rerio


Alignment Length:108 Identity:50/108 - (46%)
Similarity:69/108 - (63%) Gaps:0/108 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IIRFVRLGCTNRPFYHIVVMERRKNQHQPVIEQVGSFDPLPNDYNERLVALNTERIRYWLGKGAH 83
            :||....|.||||||.||....::.:....:|||||:|||||.:||:|||.|.|||::|:..|||
Zfish    18 VIRLALGGATNRPFYRIVAAYNKRARDGKYLEQVGSYDPLPNIHNEKLVAFNYERIKHWIACGAH 82

  Fly    84 LSTPAAELLGIAGLLPIHPRTYMTAWRNRRTAAEAEASPEKAE 126
            .:.|.|:|||:||..|:||.|...|.|.::.|:..|...:..|
Zfish    83 TTKPVAKLLGLAGFFPLHPMTITEAERRQKAASREEVKTDSQE 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS16NP_523737.1 Ribosomal_S16 24..85 CDD:459981 32/60 (53%)
mrps16NP_001006030.1 S16 17..97 CDD:272848 41/78 (53%)

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