DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6701 and AT5G35970

DIOPT Version :10

Sequence 1:NP_610920.3 Gene:CG6701 / 36550 FlyBaseID:FBgn0033889 Length:1333 Species:Drosophila melanogaster
Sequence 2:NP_198446.3 Gene:AT5G35970 / 833589 AraportID:AT5G35970 Length:961 Species:Arabidopsis thaliana


Alignment Length:838 Identity:193/838 - (23%)
Similarity:316/838 - (37%) Gaps:252/838 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 PVNGSGELVFFVDSHVFMILREQPIVIGFTIQGEKYVEQHHFMRTEALPKASFNINPYRLSSKET 365
            ||.|    |..:||.....::|:  :..||.|..:.::.......| :.:...::.|....|.::
plant   245 PVQG----VLGMDSEKVKAIQER--IDEFTSQMSQLLQVERDTELE-VTQEELDVVPTPDESSDS 302

  Fly   366 FKSKGLPPANPPIQVLSALKHEDA--QMCLASFDNQYQNYCERGREITQENLTGTLRTLLQVEDI 428
            .|         ||:.|  ::|.||  ::|        ...|......|...|.|....|.:|...
plant   303 SK---------PIEFL--VRHGDAPQELC--------DTICNLYAVSTSTGLGGMHLVLFKVGGN 348

  Fly   429 ERLQHYLSLKQSEMELHQFGRELSVKMQMGTTSMSVEDILSPGDDVLI--INEKGNPKSA----- 486
            .||.                         .||       |||||.|.|  .:.:|...:|     
plant   349 HRLP-------------------------PTT-------LSPGDMVCIRVCDSRGAGATACTQGF 381

  Fly   487 VRKMLENNNNVLELALKDFDSILRWARNVDGMVGSLDKQPRVYFARILGVSTQRVNITCERQLPD 551
            |..:.|:..:: .:||:        :|:.|..           |:::.|.|   |.|.....|.|
plant   382 VHNLGEDGCSI-GVALE--------SRHGDPT-----------FSKLFGKS---VRIDRIHGLAD 423

  Fly   552 NTTYTLIFRPLRAVMRYQYRALQQ------LSFTRHSDVQRILF----------PGEIPNTPLAS 600
            ..||.   |...|:|..|...||:      :..|...|.:.|.:          ..|:.:.|:  
plant   424 ALTYE---RNCEALMLLQKNGLQKKNPSISVVATLFGDGEDITWLEQNDYVDWSEAELSDEPV-- 483

  Fly   601 GVLQLNNKLISTNPEQMQAVRQIALSPRLKAP-YIVFGPPGTGKTSTIVEAIYQLYINRPETHIL 664
                  :||..::..     |.|||....|.| .||.||||||||..:.|.| .|.:.:.| .:|
plant   484 ------SKLFDSSQR-----RAIALGVNKKRPVMIVQGPPGTGKTGMLKEVI-TLAVQQGE-RVL 535

  Fly   665 VLAGSNTACDEVALRLLR------------AIAKAPQSQPRPLTRI-------FSANCDRRIDNI 710
            |.|.:|.|.|.:..:||.            .|:.|..|  :.|..|       |.|..:|:..::
plant   536 VTAPTNAAVDNMVEKLLHLGLNIVRVGNPARISSAVAS--KSLGEIVNSKLASFRAELERKKSDL 598

  Fly   711 ---------DDLL--------------LEYSNMYTVHFYPAVQAVHQYRIVICTL-----SLAGK 747
                     ||:|              |:.....||.     :.:...::|..|.     .|..:
plant   599 RKDLRQCLRDDVLAAGIRQLLKQLGKTLKKKEKETVK-----EILSNAQVVFATNIGAADPLIRR 658

  Fly   748 LSTGGFAANNVYTHVFVDEAAASTEAE----VLMGITCTLSPTLNLILSGDHKQLGPVLQSQRAN 808
            |.|        :..|.:|||..|.|..    :|.|..|        |||||..||.||:.|::|.
plant   659 LET--------FDLVVIDEAGQSIEPSCWIPILQGKRC--------ILSGDPCQLAPVVLSRKAL 707

  Fly   809 EWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEG---------- 863
            |.|||::|.||..          ..::..:.|:|...:|.:..|....:...|.|          
plant   708 EGGLGVSLLERAA----------SLHDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVAS 762

  Fly   864 HLRTEAPMEIVCRFHNWFYLPNATF----PIMF---HSVFGT-------TMNTKSSVSLCNNKEI 914
            ||..::|            ...||:    |::.   ...:|:       .::...:.||.|..|.
plant   763 HLLIDSP------------FVKATWITQCPLVLLDTRMPYGSLSVGCEERLDPAGTGSLYNEGEA 815

  Fly   915 DVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQYQRIQEQL-NMRNWSQIDCGSVELFQGKEKH 978
            |:|:::|..|:|.|::     ...|.:.|||..|.|.::|:| :......::..:::.|||:|..
plant   816 DIVVNHVISLIYAGVS-----PMAIAVQSPYVAQVQLLRERLDDFPVADGVEVATIDSFQGREAD 875

  Fly   979 VIIVSFVRSFT-PKLGFLNNERRLNVLLSRPISLLILIGNPRTLSQNSDFQHIIEMCR 1035
            .:|:|.|||.. ..:|||.:.||:||.::|....:.::.:..|:..|:....::...|
plant   876 AVIISMVRSNNLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIR 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6701NP_610920.3 DEXXQc_Helz-like 611..847 CDD:350796 76/287 (26%)
SF1_C_Upf1 848..1035 CDD:350195 47/212 (22%)
AT5G35970NP_198446.3 TIGR00376 277..942 CDD:273041 183/800 (23%)

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