DRSC/TRiP Functional Genomics Resources

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Protein Alignment shot and WSC3

DIOPT Version :10

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:NP_014536.1 Gene:WSC3 / 854046 SGDID:S000005465 Length:556 Species:Saccharomyces cerevisiae


Alignment Length:255 Identity:72/255 - (28%)
Similarity:104/255 - (40%) Gaps:34/255 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  8537 GVSQSMAAFTPRRSTPNAAATASSSPHAHNGGSSNLPPYMSGQGPIIKVRERSVR--SIPMSRPS 8599
            |.|.|......:.:..|.....|..|:...||||.:..|::.:..:..|...|.:  |.....||
Yeast    91 GNSVSFLTSLTKSTDSNCGTKCSGWPYQMCGGSSYMNVYVNAETFVSSVESSSSKEGSSTSYMPS 155

  Fly  8600 RSSLSASTPDSLSDNEGSHGGPSGRYTPRKVTYTSTRTGLTPGGSRAGSKPNSRPLSRQGSKPPS 8664
            .:|..:|...|.:....|....|.......|:.|||.:..|  .|...|..:|...|...|...|
Yeast   156 TTSSLSSAQISSTTRRTSTDMKSSEMIATTVSTTSTTSSST--SSTTSSTTSSTTSSTTSSTTSS 218

  Fly  8665 RHGSTLSLDSTDDHTPSRIPQRKPSTGSTASGTTPRPARLSVTTTTTPGSRLNGTSTITRKTASG 8729
            ...||.|  ||...|          |.||.|.||      |.||::|..|..:.|::|...|:|.
Yeast   219 STSSTTS--STTSST----------TSSTTSSTT------SSTTSSTTSSTTSSTTSIFSVTSSS 265

  Fly  8730 SASPAPTSNGGM--SRSSSIPALTGFGFKPIRRNISGSSTPSGMQTPRKSSAEPTFSSTM 8787
            |:....:|....  ||:|| |:.|   ..|:      ||:.|.:.||:.:|..|:.|||:
Yeast   266 SSITLSSSEHTTVDSRTSS-PSST---LVPV------SSSSSTLSTPKVTSMTPSTSSTI 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401
CH_PLEC-like_rpt2 223..327 CDD:409038
SPEC 471..689 CDD:238103
SPEC 690..866 CDD:238103
SH3_10 864..929 CDD:407754
SPEC 1047..1250 CDD:238103
SPEC 1153..1390 CDD:238103
PLEC <1498..1526 CDD:197605
Plectin 1949..1980 CDD:459901
DUF5585 2860..>3198 CDD:465521
SMC_prok_B <4936..>5564 CDD:274008
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:413338
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103
SPEC 6118..6330 CDD:238103
PRK09039 <6279..6441 CDD:181619
SPEC 6443..6660 CDD:238103
SPEC 6663..6878 CDD:238103
SPEC 6880..7087 CDD:238103
SPEC 6986..7196 CDD:238103
SPEC 7196..7417 CDD:238103
SPEC 7314..7526 CDD:238103
SPEC 7528..7747 CDD:238103
SPEC 7749..7968 CDD:238103
SPEC 7973..8181 CDD:238103
FRQ1 <8375..8444 CDD:444056
GAS2 8450..8522 CDD:128539
PHA03307 8550..>8795 CDD:223039 69/242 (29%)
WSC3NP_014536.1 WSC 39..132 CDD:214616 11/40 (28%)
Blue background indicates that the domain is not in the aligned region.

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