DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shot and Drp2

DIOPT Version :10

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:NP_076461.2 Gene:Drp2 / 66027 RGDID:621750 Length:957 Species:Rattus norvegicus


Alignment Length:1057 Identity:197/1057 - (18%)
Similarity:377/1057 - (35%) Gaps:302/1057 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  7372 HGSNLMNMCGEPDKPEVKKHIEDLDNAWD---------------------------NITALYAKR 7409
            |.|:|.|.|   .:|:|:..:......||                           |:.....|:
  Rat    27 HSSSLRNTC---PQPQVRAAVTIPAPPWDGAGDPCLSPKLLNGSVGAVGPLEPSAMNLCWNEIKK 88

  Fly  7410 EENLIDAMEKAMEFHE-----TLQNLLKFLTKAEDKFAHLGAVGSDIDAVKRQIEQLKSFKDEV- 7468
            :.:.:.|..:|...|.     .||.::.:|::.:::.:....:..|:..|:::.|...:|.:|| 
  Rat    89 KSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVK 153

  Fly  7469 --DPHMVEV-------------EALNRQAVELTERTSPEQ-----AASIREPLSVVNRRWEALLR 7513
              .|::..|             |.|.....| ::.|||.|     :..:.:..:|.:..||.|..
  Rat   154 SKGPYIYSVLESAQAFLSQHPFEELEESHSE-SKDTSPRQRIQNLSRFVWKQATVASELWEKLTA 217

  Fly  7514 GMVERQKQLEHALLHLGQFQHALNELLVWINKTDSTLDQLKPIPGDPQL--LEVELAKLKVLAND 7576
            ..|::.:.:||.|.||.:.|.|:.||...:.:.:......:|| ||..:  |...:..:|:...:
  Rat   218 RCVDQHRHIEHTLEHLLEIQGAMEELSSTLTQAEGVRATWEPI-GDLFIDSLPEHIQAIKLFKEE 281

  Fly  7577 IQAHQNSVDTLNDAGRQL-IETEKGSVEASTTQEKLRKLNNEWKQLLQKASDRQHELEEALRE-- 7638
            ....::.|..:||...|| |.....|:|.|   ..|.::|..||||....::|..:|::|.|:  
  Rat   282 FSPVKDGVKLVNDLAHQLAISDVHLSMENS---RALEQINVRWKQLQVSVAERLKQLQDAHRDFG 343

  Fly  7639 ---AHGYIAEVQDILGWLGDVDAVIGASKPVGGLPETATEQLE-------RFMEVYNELDENRPK 7693
               .|.....||  :.|    :..|..:|    :|.....|.:       :..|:|..|.:    
  Rat   344 PGSQHFLSTSVQ--VPW----ERAISPNK----VPYYINHQAQTTCWDHPKMTELYQTLAD---- 394

  Fly  7694 VETIQAQGQEYIKRQNQMKVSSSNLQHTLRTLKQRWDAVVSRASDKKIKLE-IALKEATEFHDTL 7757
                          .|.:|.|:......||.::            |.::|: :.|..|      |
  Rat   395 --------------LNNIKFSAYRTAMKLRRVQ------------KALRLDLVTLTTA------L 427

  Fly  7758 QAFVEWLTQAEKLLSNAEPVSRVLETIQAQMEEHKVLQKDVSTHREAMLLLDKKGTHLKYFSQKQ 7822
            :.|.|...||.:.:.:...|...|..:..::||.:.:..:|.      |.:|             
  Rat   428 EIFNEHDLQASEHVMDVVEVIHCLTALYERLEEERGILVNVP------LCVD------------- 473

  Fly  7823 DVILIKNLLVSVQHRWERVVSKAAERTRALDHGYKEAREFNDAWSGMMQYLQ-----------ET 7876
               :..|.|::|                           |:...||.|:.|.           |.
  Rat   474 ---MSLNWLLNV---------------------------FDSGRSGKMRALSFKTGIACLCGTEV 508

  Fly  7877 EQVLDQIIEEATASKEPQKIKKYIGKLK----ETHRQLGAKQSVYDGT-----------MRTGKN 7926
            ::.|..:..: .|:...|..::::|.|.    :..|||| :.:.:.|:           ..|||.
  Rat   509 KEKLQYLFSQ-VANSGSQCDQRHLGALLHEAIQVPRQLG-EVAAFGGSNVEPSVRSCFRFSTGKP 571

  Fly  7927 LLERAPKGDRPVLDKMLIELKEQ-WTRVWSK-------------SIDRQ--------RKLE---- 7965
            ::|.:     ..|:.:.:|.:.. |..|..:             ||.||        |.|:    
  Rat   572 VIEAS-----QFLEWVNLEPQSMVWLAVLHRVTVAEQVKHQTKCSICRQCPIKGFRYRSLKQFNV 631

  Fly  7966 ---EALLLSGQFSDALGE-----LLDWLKKAKSRLNENGPVHGDLETVQGLCEHHKHIEQDLQKR 8022
               :...|:|:.|.  |.     ::::.....|  :||  :.....|::......::..:..|:.
  Rat   632 DICQTCFLTGKASK--GNKLHYPIMEYYTPTTS--SEN--MRDFATTLKNKFRSKQYFSKHPQRG 690

  Fly  8023 AAQMQGVLKTGRDLERSGNNPEVGRQLDEMQSIWEEVKSAVAKRGERLQVALVDAEKLNARVQAL 8087
            ...:|.||::... |...::|.:..             :....|.|.....|.:.|..|.   :.
  Rat   691 YLPVQSVLESDCS-ETPASSPMLPH-------------ADTHSRIEHFASRLAEMESQNC---SF 738

  Fly  8088 F-------DWLDHAEHKLRYAKNAPDDEKVSREMMDIHMDFMKDLRVREREKTETFEYAEDIINK 8145
            |       |.:|..::.||::....|.|....:.....|            .||:....|.|: .
  Rat   739 FNDSLSPDDSIDEDQYLLRHSSPITDREPAFGQQAPCSM------------ATESKGELEKIL-A 790

  Fly  8146 AYPDAIPIIKNWLSIIQQRWEEVRQWAINRESKLEQHLQSLKDLDDTIEELLAWLSGLEGTLLNL 8210
            ...|...|::..|..::.:.||    |:...:..|...::..|..:  |||||     |..:|..
  Rat   791 HLEDENRILQGELRRLKWQHEE----AVEAPTLAEGSAEATPDHRN--EELLA-----EARILRQ 844

  Fly  8211 KHEQLPDEIPPVEKLIEDHKEFMENTARRQNEVDRACKPRQLPPGARKPSRSGKTPVFKGSRDQG 8275
            ...:|...:    :::|||.:.:|:..:|..|:     ..|.|..:.....:|.:......:.:|
  Rat   845 HKSRLETRM----QILEDHNKQLESQLQRLREL-----LLQPPTESDGNGSAGSSLASSPRQSEG 900

  Fly  8276 LNARKGSRITPTRDTPD 8292
            .:.|:..:.||..:..|
  Rat   901 SHPREKGQTTPDTEAAD 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401
CH_PLEC-like_rpt2 223..327 CDD:409038
SPEC 471..689 CDD:238103
SPEC 690..866 CDD:238103
SH3_10 864..929 CDD:407754
SPEC 1047..1250 CDD:238103
SPEC 1153..1390 CDD:238103
PLEC <1498..1526 CDD:197605
Plectin 1949..1980 CDD:459901
DUF5585 2860..>3198 CDD:465521
SMC_prok_B <4936..>5564 CDD:274008
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:413338
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103
SPEC 6118..6330 CDD:238103
PRK09039 <6279..6441 CDD:181619
SPEC 6443..6660 CDD:238103
SPEC 6663..6878 CDD:238103
SPEC 6880..7087 CDD:238103
SPEC 6986..7196 CDD:238103
SPEC 7196..7417 CDD:238103 11/71 (15%)
SPEC 7314..7526 CDD:238103 39/206 (19%)
SPEC 7528..7747 CDD:238103 49/234 (21%)
SPEC 7749..7968 CDD:238103 46/273 (17%)
SPEC 7973..8181 CDD:238103 35/219 (16%)
FRQ1 <8375..8444 CDD:444056
GAS2 8450..8522 CDD:128539
PHA03307 8550..>8795 CDD:223039
Drp2NP_076461.2 Spectrin 1 102..179 13/76 (17%)
SPEC 111..339 CDD:238103 55/232 (24%)
Spectrin 2 231..337 29/109 (27%)
WW 357..385 CDD:238122 5/35 (14%)
EFh_DRP-2 422..583 CDD:320006 38/222 (17%)
EF-hand-like motif 422..460 CDD:320006 9/43 (21%)
EF-hand-like motif 468..502 CDD:320006 11/82 (13%)
EF-hand-like motif 508..544 CDD:320006 5/36 (14%)
EF-hand-like motif 557..583 CDD:320006 5/30 (17%)
ZZ_dystrophin 608..656 CDD:239074 10/49 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 877..923 7/41 (17%)
Blue background indicates that the domain is not in the aligned region.

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