DRSC/TRiP Functional Genomics Resources

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Protein Alignment shot and gas2a

DIOPT Version :10

Sequence 1:NP_725339.1 Gene:shot / 36542 FlyBaseID:FBgn0013733 Length:8805 Species:Drosophila melanogaster
Sequence 2:XP_068073680.2 Gene:gas2a / 557312 ZFINID:ZDB-GENE-091013-1 Length:350 Species:Danio rerio


Alignment Length:94 Identity:33/94 - (35%)
Similarity:51/94 - (54%) Gaps:13/94 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  8445 PANDSD-------KIHDEVKRLVM---LCTCRQKFRVFQVGEGKYRFGDSQKLRLVRILRST-VM 8498
            |.|.|:       |:.||..:.:.   .|.|..||.:.:..:|:||.|  :|:..:|:|.:. ||
Zfish   227 PFNKSNSSKKSTGKLLDEAVKHISEDPPCKCPNKFCIERQSQGRYRVG--EKMLFIRMLHNKHVM 289

  Fly  8499 VRVGGGWVALDEFLQKNDPCRAKGRTNIE 8527
            |||||||...:.:|.|:||||....:.:|
Zfish   290 VRVGGGWETFESYLLKHDPCRMLQISRVE 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shotNP_725339.1 SAC6 204..>420 CDD:227401
CH_PLEC-like_rpt2 223..327 CDD:409038
SPEC 471..689 CDD:238103
SPEC 690..866 CDD:238103
SH3_10 864..929 CDD:407754
SPEC 1047..1250 CDD:238103
SPEC 1153..1390 CDD:238103
PLEC <1498..1526 CDD:197605
Plectin 1949..1980 CDD:459901
DUF5585 2860..>3198 CDD:465521
SMC_prok_B <4936..>5564 CDD:274008
SPEC 5304..5513 CDD:238103
SPEC <5658..5787 CDD:413338
SPEC 5793..6007 CDD:238103
SPEC 6011..6220 CDD:238103
SPEC 6118..6330 CDD:238103
PRK09039 <6279..6441 CDD:181619
SPEC 6443..6660 CDD:238103
SPEC 6663..6878 CDD:238103
SPEC 6880..7087 CDD:238103
SPEC 6986..7196 CDD:238103
SPEC 7196..7417 CDD:238103
SPEC 7314..7526 CDD:238103
SPEC 7528..7747 CDD:238103
SPEC 7749..7968 CDD:238103
SPEC 7973..8181 CDD:238103
FRQ1 <8375..8444 CDD:444056
GAS2 8450..8522 CDD:128539 29/82 (35%)
PHA03307 8550..>8795 CDD:223039
gas2aXP_068073680.2 None
Blue background indicates that the domain is not in the aligned region.

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