DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba3 and UBA3

DIOPT Version :10

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_003959.3 Gene:UBA3 / 9039 HGNCID:12470 Length:463 Species:Homo sapiens


Alignment Length:431 Identity:277/431 - (64%)
Similarity:344/431 - (79%) Gaps:6/431 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RFNGLRNILEREGPFCKDGFAASSENLEFLQTKCQVLIIGAGGLGCELLKDLALMGFGNLHVIDM 80
            |:|.::..|||.|||....|..|:|:|:||...|:||:||||||||||||:|||.||..:|||||
Human    37 RWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDM 101

  Fly    81 DTIELSNLNRQFLFRRTDIGASKAECAARFINARVPTCRVTPHFKKIQDFDESFYQQFHLVVCGL 145
            |||::||||||||||..|||..|||.||.|:|.|||.|.|.|||.|||||:::||:|||::||||
Human   102 DTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGL 166

  Fly   146 DSIVARRWINGMLLSMLRYEEDGTIDTSSIVPMIDGGTEGFKGNARVILPGFTACIECTLDLFPP 210
            |||:|||||||||:|:|.| |||.:|.|||||:||||||||||||||||||.||||||||:|:||
Human   167 DSIIARRWINGMLISLLNY-EDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPP 230

  Fly   211 QVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPF--GVPLDGDDPQHIGWIYERALERSNEFNIT 273
            |||:|:||||:.|||||||||||:::||.|:.||  |||||||||:||.||::::|||::::||.
Human   231 QVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIR 295

  Fly   274 GVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKLATSCYDSMANYLNFNDLDGIYTYTYEAEK 338
            ||||||.|||||.||||||||||.|||.||.||||:|||.|..:.|||.|||:||:||||:|||:
Human   296 GVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAER 360

  Fly   339 SENCLACSNTPQPLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVMKDGKRRTLYMSGVKSIE 403
            .|||.|||..||  .|:...:..|::|:..|.:|...|:||||:|..: :||.||||:..|.|||
Human   361 KENCPACSQLPQ--NIQFSPSAKLQEVLDYLTNSASLQMKSPAITATL-EGKNRTLYLQSVTSIE 422

  Fly   404 EATRKNLTQSLGELGLHDGQQLTVTDATSPSAMTLQLKYQS 444
            |.||.||:::|.||||.|||:|.|.|.|:|..:..:|.:.|
Human   423 ERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHFTS 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 Uba3_RUB 50..346 CDD:238765 217/297 (73%)
E2_bind 357..442 CDD:462611 39/84 (46%)
UBA3NP_003959.3 Interaction with UBE2M N-terminus 53..70 6/16 (38%)
Uba3_RUB 71..368 CDD:238765 217/297 (73%)
Interaction with UBE2M N-terminus 157..161 2/3 (67%)
Interaction with UBE2M N-terminus 192..217 22/24 (92%)
Interaction with NEDD8 227..229 1/1 (100%)
Interaction with NAE1. /evidence=ECO:0000269|PubMed:12740388 242..248 4/5 (80%)
Interaction with NAE1. /evidence=ECO:0000269|PubMed:12740388 292..295 1/2 (50%)
Interaction with UBE2M N-terminus 331..338 4/6 (67%)
Interaction with NEDD8 352..357 4/4 (100%)
Interaction with UBE2M core domain 368..463 43/97 (44%)
E2_bind 376..461 CDD:462611 39/85 (46%)

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