DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba3 and uba2

DIOPT Version :10

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_009296132.1 Gene:uba2 / 406672 ZFINID:ZDB-GENE-040426-2681 Length:641 Species:Danio rerio


Alignment Length:554 Identity:137/554 - (24%)
Similarity:213/554 - (38%) Gaps:187/554 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TKCQVLIIGAGGLGCELLKDLALMGFGNLHVIDMDTIELSNLNRQFLFRRTDIGASKAECAARFI 111
            :.|:||::||||:||||||:|.|.||.|:.|||:|||::|||||||||::..:|.|||:.|...:
Zfish    17 SSCRVLVVGAGGIGCELLKNLVLTGFKNIEVIDLDTIDVSNLNRQFLFQKKHVGKSKAQVAKESV 81

  Fly   112 NARVPTCRVTPHFKKIQ--DFDESFYQQFHLVVCGLDSIVARRWINGMLLSMLRYEEDGTIDTSS 174
            ....|:..:|.:...|.  |::..|::.|.||:..||:..||..:|.|.|             ::
Zfish    82 LRFCPSANITAYHDSIMNPDYNVEFFRNFQLVMNALDNRAARNHVNRMCL-------------AA 133

  Fly   175 IVPMIDGGTEGFKGNARVILPGFTACIECTLDLFPPQVNYPLCTIANTPRLPEHCIEYVKI---- 235
            .:|:|:.||.|:.|...||..|.|.|.||...  |.|..:|.|||.|||..|.|||.:.|.    
Zfish   134 DIPLIESGTAGYLGQVTVIKKGQTECYECQPK--PTQKTFPGCTIRNTPSEPIHCIVWAKYLFNQ 196

  Fly   236 ----------------------------------------------------------------- 235
                                                                             
Zfish   197 LFGEEDADQEVSPDTADPEAAWNPADAAARATASDQDGDIKRVSTKEWARSTGYDPIKLFNKLFK 261

  Fly   236 ---------------------IQWEKQNPF----------------------------------- 244
                                 ::||:.|..                                   
Zfish   262 DDIMYLLTMDKLWKKRKAPLPLEWEEINQLAGSQEQVIGSGLKDQQVLGVQGYAQLFQHSVETLR 326

  Fly   245 --------GVPL--DGDDPQHIGWIYERALERSNEFNITGVTYRLVQGVVKHIIPAVASTNAAIA 299
                    |..|  |.|||..:.::...:..|.|.|::...:...|:.:..:||||:|:|||.||
Zfish   327 SQLKEKGDGAELVWDKDDPPAMDFVTAASNLRMNVFSMNMKSRFDVKSMAGNIIPAIATTNAVIA 391

  Fly   300 AACALEVFKLATSCYDSMAN-YLNFND-----------LDGIYTYTYEAEKSENCLACSNTPQ-- 350
            ....||..|:..|.::.... :||...           ||         ..:.:|..|::.|:  
Zfish   392 GLIVLEALKILNSDFEQCRTIFLNKQPNPRKKLLVPCALD---------PPNASCYVCASKPEVT 447

  Fly   351 -PLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVMKDGKRRTLYMSGVKSIEEATRKNLTQSL 414
             .|.:.......|:|  |:|  ..:|.:.:|.:.  ::|||...|    :.|.|..|..|..:.|
Zfish   448 VKLNVHKTMVQALQD--KIL--KEKFGMVAPDVQ--IEDGKGTIL----ISSEEGETEANNNKFL 502

  Fly   415 GELGLHDGQQLTVTDATSPSAMTLQLKYQSNEVE 448
            .:.|:.:|.:|...|......:.:.: ..|.|:|
Zfish   503 SDFGIRNGSRLQADDFLQDYTLLVNV-IHSEELE 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 Uba3_RUB 50..346 CDD:238765 111/444 (25%)
E2_bind 357..442 CDD:462611 19/84 (23%)
uba2XP_009296132.1 Uba2_SUMO 20..440 CDD:238766 111/443 (25%)
UAE_UbL 448..534 CDD:464286 21/96 (22%)
UBA2_C 545..628 CDD:465058
Blue background indicates that the domain is not in the aligned region.

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