DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba3 and mocs3

DIOPT Version :10

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_956421.2 Gene:mocs3 / 393095 ZFINID:ZDB-GENE-040426-782 Length:459 Species:Danio rerio


Alignment Length:318 Identity:73/318 - (22%)
Similarity:108/318 - (33%) Gaps:95/318 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VLIIGAGGLGCELLKDLALMGFGNLHVIDMDTIELSNLNRQFLFRRTDIGASKAECAARFINARV 115
            ||::|.|||||.|.:.||..|.|.|.::|.|.:|||||:||.|......|..||..||:.|:...
Zfish    85 VLVVGCGGLGCPLAQYLAAAGIGRLGLLDYDVVELSNLHRQVLHTELTQGQPKALSAAQAISRMN 149

  Fly   116 PTCRVTP-HFKKIQDFDESFYQQFHLVVCGLDSIVARRWINGMLLSMLRYEEDGTIDTSSIVPMI 179
            .|.:..| |.:..::......||:.:|....|::..|..:|           |..:.||.  |::
Zfish   150 STVQCVPYHLQLSRENAIQLIQQYDIVADCSDNVPTRYLVN-----------DACVLTSR--PLV 201

  Fly   180 DGGTEGFKGNARVILPGFTACIECTLDLFPPQVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPF 244
            .......:|...|.......|..|...:.||            |....:|.:             
Zfish   202 SASALRMEGQLTVYNYRGGPCYRCLYPIPPP------------PETVTNCSD------------- 241

  Fly   245 GVPLDGDDPQHIGWIYERALERSNEFNITGVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKL 309
                                                 |.|..::|.:      :....||||.|:
Zfish   242 -------------------------------------GGVLGVVPGI------MGCLQALEVLKI 263

  Fly   310 ATSCYDSMANYLNFNDLDGIYTYTYE---AEKSENCLACSNTPQPLPIEDPNTTTLED 364
            |:....|.|..|..  .||..|....   ..:.:.|:.|.        |.|..|.|:|
Zfish   264 ASGQECSFAQQLLM--FDGEQTRFRSIRLRSRQKECVVCG--------EKPTITELQD 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 Uba3_RUB 50..346 CDD:238765 67/298 (22%)
E2_bind 357..442 CDD:462611 4/8 (50%)
mocs3NP_956421.2 None

Return to query results.
Submit another query.