DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba3 and Uba1y

DIOPT Version :10

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_030107423.1 Gene:Uba1y / 22202 MGIID:98891 Length:1087 Species:Mus musculus


Alignment Length:248 Identity:76/248 - (30%)
Similarity:120/248 - (48%) Gaps:41/248 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FNGLRNILEREGPFCKD-----------GFAASSENLEFLQTKCQVLIIGAGGLGCELLKDLALM 70
            |:.|..:.|....|.:|           ..|....:|:....|.:..::|||.:||||||:.|::
Mouse   425 FDALECLPEHRVAFMEDKCLPHQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMI 489

  Fly    71 GF-----GNLHVIDMDTIELSNLNRQFLFRRTDIGASKAECAARFINARVPTCRVTPHFKKI--- 127
            |.     |.:.|.||||||.||||||||||..||...|:|.||..:....|..|:..|..::   
Mouse   490 GLGCGEDGEITVTDMDTIEKSNLNRQFLFRPWDITKLKSETAAAAVRDINPHIRIFSHQNRVGPE 554

  Fly   128 --QDFDESFYQQFHLVVCGLDSIVARRWINGMLLSMLRYEEDGTIDTSSIVPMIDGGTEGFKGNA 190
              ..:|:.|:|:...|...||::.||.:::...:...:             |:::.||.|.|||.
Mouse   555 TEHVYDDDFFQKLDGVANALDNVDARLYVDRRCVYYRK-------------PLLESGTLGTKGNV 606

  Fly   191 RVILPGFTACIECTLDLFPPQVNYPLCTIANTPRLPEHCIE-----YVKIIQW 238
            :|::|..|.....:.|  ||:.:.|:||:.|.|...||.::     ..|:.:|
Mouse   607 QVVVPFLTESYSSSQD--PPEKSIPICTLKNFPNAIEHTVQGRLHALKKVARW 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 Uba3_RUB 50..346 CDD:238765 68/204 (33%)
E2_bind 357..442 CDD:462611
Uba1yXP_030107423.1 Ube1 48..1084 CDD:273603 76/248 (31%)
Blue background indicates that the domain is not in the aligned region.

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