DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tum and Arhgap45

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001334003.1 Gene:Arhgap45 / 70719 MGIID:1917969 Length:1127 Species:Mus musculus


Alignment Length:625 Identity:136/625 - (21%)
Similarity:226/625 - (36%) Gaps:154/625 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LRMFEQ-YHEKCAGY---AAETARIQNELDKSLTKMGDLEGKLFHARRIIDMEIKARRQAEHERD 92
            ||..:| |.::|..:   ..:.|:.:.|...:....|....|....||.::.|  |:.:||   :
Mouse   412 LRKAKQGYKQRCEDHDKARLQVAKAEEEQQGTGPGAGTAASKALDKRRRLEEE--AKNKAE---E 471

  Fly    93 AMESKIMAVADLLRHERNLNNETRDKLAFLHTLPSSRKRKSLNAVREDKSYGDINSTGSLLSDLS 157
            ||.:....|||....::.|.:               .|..:|..::|.....|.....:.:|...
Mouse   472 AMATYRTCVADAKTQKQELED---------------TKVTALRQIQEVIRQSDQTIKSATISYYQ 521

  Fly   158 ITHSEDDFLDV------RTSK------SWREHRPSLPKNQIPSV---------GNKRSRLSTGLN 201
            :.|.:...|.|      .:||      .:..|...|.:.:.|.|         .|..|.:.....
Mouse   522 LMHMQTAPLPVNFQMLCESSKLYDPGQQYASHVRQLQRGEEPDVRYDFEPYVSNNSWSPIMRTRK 586

  Fly   202 GSM----------SGTTPTTG--------KSRRSSVGIGVEQH---TVDVGQGAERFCATTKVTI 245
            ||.          :|:.|..|        |..|.  |.|.:.|   .:.:        :.|:|.:
Mouse   587 GSFNPGDASGPEAAGSPPEEGGTSEAAPNKDHRG--GRGHQVHKSWPISI--------SDTEVGL 641

  Fly   246 PQDGQGVIRAESTIESLPVIAGNERIGD---GLSSTPRRSVLKEATAPPLTPVNAMAPHV-VAES 306
             ....|.::......|...::.:|.:||   ||          .|:|.....:|.|.|.: ||..
Mouse   642 -DTSSGDLKKFDRTSSSGTMSSSEELGDQEAGL----------VASAFDSADLNGMDPELPVAMP 695

  Fly   307 GTPLQHRPL---MRNHTFSQKTFLRGD-NCVQCQKRIRFGAVGLRCRDCPVRCHIDCRYLLTVSC 367
            ..|.:|..|   .|.|...:   ||.. .|.:|...:.|  .|..|.:|.:.||..|...|.:.|
Mouse   696 SGPFRHVGLSKAARTHRLRK---LRTPAKCRECNSYVYF--QGAECEECCLACHKKCLETLAIQC 755

  Fly   368 VPQTGTPTTKTMTG----YVTDF---APSIAPMIPALIVHCVNEIEARGLTEVGLYRLSSSEREY 425
                   ..|.:.|    :..||   |.|....:|.::..||.|||.|.|...|:||::..:...
Mouse   756 -------GHKKLQGRLQLFGQDFSQAALSTPDGVPFIVKKCVCEIERRALHTKGIYRVNGVKTRV 813

  Fly   426 KALKEQFLRGKATPHLGNTDIYVLCCCVKDFLRSLTEPLIPTSQWKDFANAVQN-----PDTKTA 485
            :.|.:.|..||....|.....:.:...:|.:||.|.||||....:.:.....::     .:.|.|
Mouse   814 EKLCQAFENGKELVELSQASPHDISNVLKLYLRQLPEPLISFRFYHELVGLAKDSLKAEAEAKAA 878

  Fly   486 Q-----------------DMLVKSVKQLPQANRDTLAFLILHFQRIAQCPVVLMPID------NI 527
            .                 ..|.:.::.||..||.||.:|:.|.:||.:     |..|      |:
Mouse   879 SRGRQGGSESEAATLAMVGRLRELMQDLPAENRATLLYLLKHLRRIVE-----MEQDNKMTPGNL 938

  Fly   528 SLIFGPTIVGYSTPDPDQHAIYTEVFT----QKQVMKALL 563
            .::||||::   .|.|....:......    |.:|::.|:
Mouse   939 GIVFGPTLL---RPRPTDATVSLSSLVDYPHQARVIETLI 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 13/48 (27%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 54/222 (24%)
Arhgap45NP_001334003.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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