DRSC/TRiP Functional Genomics Resources

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Protein Alignment mip120 and AT4G29000

DIOPT Version :10

Sequence 1:NP_001163143.1 Gene:mip120 / 36499 FlyBaseID:FBgn0033846 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_194629.1 Gene:AT4G29000 / 829021 AraportID:AT4G29000 Length:603 Species:Arabidopsis thaliana


Alignment Length:323 Identity:100/323 - (30%)
Similarity:140/323 - (43%) Gaps:102/323 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   546 DSSDAGPEAKKPRYVITMQQGS-QKAASQPVQKLINRTANVQRVVSSSTSPSS---NSTKKI--Y 604
            |..:.|...|||...:....|| :.:.|:|....:..| :|:.::|||. ||:   ..|..|  .
plant    15 DGVEEGFPTKKPARQLDFTGGSDEHSLSKPAAPTVVAT-SVKPIISSSV-PSTIRPGMTIAIGQV 77

  Fly   605 NYVQPTGSNGAKYMICNSGVPQSSTSAMRRGYTGYVENKTRRPPPISPQQHRFKQMGPQQQSKHQ 669
            ..|:||             :|.::|.:.....:..|....|.|.|.||     |..||:      
plant    78 TQVRPT-------------LPMATTMSNPPSQSQIVNAPIRHPIPESP-----KARGPR------ 118

  Fly   670 QLQAQAKQRIRQQQLPTEQSTPIKVEPKLPTLPPGVKANVPAKPLFEVLKPPATAAAAGAVDPLG 734
                                             |.|:..                         .
plant   119 ---------------------------------PNVEGR-------------------------D 125

  Fly   735 GMTSRRKHCNCSKSQCLKLYCDCFANGEFCQDCTCKDCFNNLDYEVERERAIRSCLDRNPSAFKP 799
            |...::|.|||..|:||||||:|||:|.:|..|.|.:||||:|.|..|..|:.:.|:|||.||:|
plant   126 GTPQKKKQCNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVDNEPARREAVEATLERNPFAFRP 190

  Fly   800 KI-TAPNSG-DMR----------LHNKGCNCKRSGCLKNYCECYEAKIPCSSICKCVGCRNME 850
            || ::|:.| |.|          .|||||:||:|||||.||||::|.|.||..|||:.|:|.|
plant   191 KIASSPHGGRDKREDIGEVVLLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFE 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mip120NP_001163143.1 TCR 740..775 CDD:461001 20/34 (59%)
TCR 813..850 CDD:461001 24/36 (67%)
AT4G29000NP_194629.1 TCR 131..167 CDD:461001 21/35 (60%)
TCR 216..251 CDD:461001 23/34 (68%)

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