DRSC/TRiP Functional Genomics Resources

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Protein Alignment mip120 and AT3G16160

DIOPT Version :10

Sequence 1:NP_001163143.1 Gene:mip120 / 36499 FlyBaseID:FBgn0033846 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_188237.2 Gene:AT3G16160 / 820861 AraportID:AT3G16160 Length:368 Species:Arabidopsis thaliana


Alignment Length:284 Identity:89/284 - (31%)
Similarity:145/284 - (51%) Gaps:26/284 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   683 QLPTEQSTPIKVEPKLPTLPPGVKANVPAKPLFEVLKPPATAAAAGAVDPLG--GMTSRR-KHCN 744
            ::.||:.....|..||...|...::.|...|||    ||.:...:.|.|...  |:|||: |.|.
plant     9 KIATEKDPRKLVFTKLEVSPVFRESPVKELPLF----PPISREHSEAKDKTDEEGITSRKHKGCR 69

  Fly   745 CSKSQCLKLYCDCFANGEFCQDCTCKDCFNNLDYEVERERAIRSCLDRNPSAFKPKI-------- 801
            |.:|:||||||||||:|..|.||.|.||.||.:....||.|:.:.|.|||:||..|.        
plant    70 CKQSKCLKLYCDCFASGVVCTDCDCVDCHNNSEKCDAREAAMVNVLGRNPNAFSEKALGSLTDNQ 134

  Fly   802 --TAPNSGDMRLHNKGCNCKRSGCLKNYCECYEAKIPCSSICKCVGCRNMEDRPDVDMDSLDGLM 864
              .||:: ...|.::||.|||:.|||.||||::|.:.||..|||:.|:|:.:.......|.....
plant   135 CKAAPDT-KPGLLSRGCKCKRTRCLKKYCECFQANLLCSDNCKCINCKNVSEAFQPPAFSAHNSP 198

  Fly   865 GVEGQKKDKAKNKQLNENRANIY-FTDDVIEATI---MCMISRIVMHEKQNVAVEDMEREVMEEM 925
            .|..:::|: :..:.|...|.:: ..|:.|:..:   |....::...:|:::.  .....::.::
plant   199 QVYRRRRDR-ELTEWNSCPAPLFSIPDNSIQNALGSPMSCSPKLPYRKKRSLM--GYTSTLLPDL 260

  Fly   926 GESLTQIIAFAKEKQETSQIDESK 949
            |: |..::..|.|...|:..|:::
plant   261 GD-LCSLLVAASESATTTAEDQNR 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mip120NP_001163143.1 TCR 740..775 CDD:461001 21/35 (60%)
TCR 813..850 CDD:461001 20/36 (56%)
AT3G16160NP_188237.2 TCR 65..101 CDD:461001 22/35 (63%)
TCR 147..182 CDD:461001 19/34 (56%)

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