DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbc and selenoi

DIOPT Version :10

Sequence 1:NP_610877.2 Gene:bbc / 36496 FlyBaseID:FBgn0033844 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_001004832.3 Gene:selenoi / 448097 XenbaseID:XB-GENE-991194 Length:400 Species:Xenopus tropicalis


Alignment Length:420 Identity:115/420 - (27%)
Similarity:188/420 - (44%) Gaps:72/420 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSAQQLRKLSEHKYSCFSVSLLD-PLLQPWWNWLVAQTPLWLAPNLITIVGLILNVVTTLILICY 75
            :|.:||....::|||....:.|. .::.|:||.:|...|.||||||||..|.:|.|.|.|::..:
 Frog     6 VSPEQLAGFDKYKYSAVDTNPLSLYVMHPFWNSIVRFFPTWLAPNLITFSGFLLLVFTFLLMAFF 70

  Fly    76 SPN------GVEAPPRWTCLLCALGLFIYQSLDSIDGKQARRTNTSSPLGELFDHGCDSISTVF- 133
            .|:      |.|..|.|..::..|..|...:||.:|||||||||:|:|||||||||.||.:.:| 
 Frog    71 DPDFYASAPGQEHVPNWVWIVAGLLNFTAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWACIFF 135

  Fly   134 ------------VALSACISCQLGHYPNWLFFQCFCAIALFYCAHWQTYVSGTMRFGRIDVTEAQ 186
                        ..:||.:          |:|..:..:..|..:||:.|.:|.: |.......:|
 Frog   136 VVTVYSIFGRGETGVSAVV----------LYFLLWVVLFSFILSHWEKYNTGIL-FLPWGYDLSQ 189

  Fly   187 FSIIAIHLVSAALGPEIWLTKIPIVGLSWNYTIL---VFITF--------GYTLNIINFLKMFTQ 240
            .:|..::||:|.:|.|.|..  |:|     :.||   :|.|.        ...:::.|..|    
 Frog   190 VTISCVYLVTAVVGVETWYQ--PVV-----FNILYRDLFTTMIVGCAVCVTLPMSLYNVFK---- 243

  Fly   241 GGSGKNGSSVAGTSVLSPSIPL----TLVVLPALMIAQKSPQNLFTEHASVYIMAFGMVAAKVTN 301
               |...:::..||:....:|:    .|.:|..|.|. .||..:...|..::....|...|.:|.
 Frog   244 ---GYRNNTLKHTSLYEAMLPIISPVLLFILSTLWIL-ASPSKILEHHPRLFYFMVGTTFANITC 304

  Fly   302 KLVIAHMTKAEMEYLDWSLLGPSLLFLNQYFNCIVP--EIWLLWFTLIWGTQDLLRYCAQVCLEI 364
            :|::..|:......|.| ||.|..|.:....:.:.|  |...|....:..|...:.|...|..::
 Frog   305 QLIVCQMSNTRCRPLSW-LLIPLTLAVVVSLSTVTPRDETLALVLLTVLVTLAHIHYGVNVVNQL 368

  Fly   365 CQHLRIDLFRIPYTPKGATPHPATASVSSQ 394
            .:|..|    :|::.:    .|:|..:..:
 Frog   369 SKHFNI----LPFSLR----KPSTDULEEE 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbcNP_610877.2 PRK10832 20..375 CDD:469774 109/391 (28%)
selenoiNP_001004832.3 PRK10832 5..381 CDD:469774 113/409 (28%)

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