DRSC/TRiP Functional Genomics Resources

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Protein Alignment: cid and CSE4

Sequence 1:NP_523730.2 Gene:cid FlyBaseID:FBgn0040477 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_012875.2 Gene:CSE4 SGDID:S000001532 Length:229 Species:Saccharomyces cerevisiae

Alignment Length:199 Identity:58/200 (29%)
Similarity:91/200 (46%) Gaps:33/200 (17%)


  Fly    48 LTLQDNNRRSSTL--RRDAGRRQPAAR-DSSTSGEEEDQE-NRYPTTRSPQTRRMTVQQESKTRA 108
            |:|....|.:..|  ||:..||..::: |.....:.|||. |....|.:.:      :.|.:|..
Yeast    39 LSLLQRTRATKNLFPRREERRRYESSKSDLDIETDYEDQAGNLEIETENEE------EAEMETEV 97

  Fly   109 AGPVAAQN--------QTRRRKAANPMSRAKRMDR----------EIRRLQHHPGTLIPKLPFSR 155
            ..||...:        |.||.|...  ...||:::          |||:.|.....||.|:||:|
Yeast    98 PAPVRTHSYALDRYVRQKRREKQRK--QSLKRVEKKYTPSELALYEIRKYQRSTDLLISKIPFAR 160

  Fly   156 LVREFIVKY-SDDEPLRVTEGALLAMQESCEMYLTQRLADSYMLTKHRNRVTLEVRDMALMAYIC 219
            ||:|...:: :.|:.||....|::|:||:.|.||...|..:.:|..|..|:|:..:||.|...| 
Yeast   161 LVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRI- 224

  Fly   220 DRGR 223
             ||:
Yeast   225 -RGQ 227

Known Domains:


GeneSequenceDomainRegion External IDIdentity
cidNP_523730.2 Histone 90..219 CDD:278551 43/148 (29%)
H4 135..219 CDD:304892 32/95 (34%)
CSE4NP_012875.2 H3 124..229 CDD:128705 36/107 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG1745
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 61 1.000 Inparanoid score I1747
Isobase 1 0.950 0.704428 Normalized mean entropy S10
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

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