DRSC/TRiP Functional Genomics Resources

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Protein Alignment: cid and cpar-1

Sequence 1:NP_523730.2 Gene:cid FlyBaseID:FBgn0040477 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_499073.1 Gene:cpar-1 WormBaseID:WBGene00010036 Length:261 Species:Caenorhabditis elegans

Alignment Length:164 Identity:48/165 (29%)
Similarity:72/165 (44%) Gaps:18/165 (11%)


  Fly    66 RRQPAARDSSTSGEEEDQE-----NRYPT--TRSPQTRRMTVQQESKTRAAGPVAAQNQTRRRKA 123
            ||..::.:..|:.....|.     ||..|  |......|.......:.|.   :|.:|:..:.:.
 Worm   102 RRHDSSDEEITAANSHHQSPINVGNRNDTDGTNGRNGSRAGSSSSDRVRM---IAGRNRISKTRR 163

  Fly   124 ANPMSRAKRMDREIRRLQHHPGTLIPKLPFSRLVREFI---VKYSDDEPLRVTEGALLAMQESCE 185
            ..|..:|.   .|||:.|.....||||.||:|||||.:   ..:|.|  ||:...|:.|:||:.|
 Worm   164 YRPGQKAL---EEIRKYQESEDLLIPKAPFARLVREIMQTSTPFSSD--LRIRSDAINALQEASE 223

  Fly   186 MYLTQRLADSYMLTKHRNRVTLEVRDMALMAYIC 219
            ..|.|....|.:::.|..|.||...|:.|...:|
 Worm   224 ALLVQMFDGSSLISAHSKRATLTTTDVQLYRRLC 257

Known Domains:


GeneSequenceDomainRegion External IDIdentity
cidNP_523730.2 Histone 90..219 CDD:278551 40/132 (30%)
H4 135..219 CDD:304892 33/87 (38%)
cpar-1NP_499073.1 Histone 132..257 CDD:278551 40/133 (30%)
H3 156..261 CDD:128705 37/108 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG1745
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 58 1.000 Inparanoid score I3990
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR11426
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 1 0.960
44.010

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