DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbc and CLPS5

DIOPT Version :10

Sequence 1:NP_610876.1 Gene:cbc / 36494 FlyBaseID:FBgn0033842 Length:423 Species:Drosophila melanogaster
Sequence 2:NP_198809.2 Gene:CLPS5 / 833990 AraportID:AT5G39930 Length:424 Species:Arabidopsis thaliana


Alignment Length:411 Identity:144/411 - (35%)
Similarity:232/411 - (56%) Gaps:14/411 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LESDSELRFEIEQKDAKVLVSLVSGFAELFGTELVKKKQYEFGVGAKVAIFTYQGCVLHVSGKMD 75
            ||..||||.|: |..:.:.:.|:.|.||:||.||..:....|......|:||:.|..:.:.|...
plant    11 LEKQSELRIEL-QPTSPLRLRLLDGKAEIFGYELPHEVWITFPPLMTFAVFTWYGATIEIDGITG 74

  Fly    76 VCYISKETPMVQYVNCHAAL--EQFRMEAEEKD----RYGPVAMVVGPMDVGKSTLCRILLNYAV 134
            ..|||.|||||.|:..|.:|  ::.|:.:..:|    :.||..::||.:|.|||||.::|||:||
plant    75 NEYISCETPMVNYLGLHNSLQVQRHRVTSSTRDSASSQEGPRVIIVGDIDSGKSTLAKMLLNWAV 139

  Fly   135 RVGRRPLYADLDVGQGSIAISGSVATILIERPANVEEGFAKTAPLVYHFGHKSPSGNSVLYNAVV 199
            :.|.:|.:.||:|||.||.|.|::|...|:...:..|||.....|:::||..:||.|..||..:|
plant   140 KDGWKPTFVDLNVGQSSITIPGTIAAAPIKMLVDPVEGFPLDKALIHYFGLTNPSVNLRLYRTLV 204

  Fly   200 SKMAEVTLQSLNSNKRTKSSGIIINTCGWVKGSGYAHLLHAAKAYGACAIFVLDQ-ERLYNELLR 263
            .::|....:..::|..:::||::|:|.|::...|||.||||.:.:.|..:.|:.| |:|..:|.:
plant   205 EELARELKEEFSANAESRASGMVIDTMGFIVREGYALLLHAIRTFNASLVIVVGQEEKLVYDLKK 269

  Fly   264 DV--PKGVHVVLLPKSGGVVERSKELRHEARDQRIKEYFYGNTRAPFYPFSFEVKFQDLRLYKIG 326
            ::  .|.:.|:.|.||.||..||.:.|...|:..|:.||||.|. ....::..|||.|:::|:||
plant   270 NLKFKKNLQVLNLEKSEGVFSRSSDFRKTLRNSNIQNYFYGVTN-DLTVYTKTVKFSDVQVYRIG 333

  Fly   327 APPLPDSCMPIGMKAEDNKTKVVAVTPTPALIHHVLALSFAESVEDDVIGTNVAGFCCVTEVDME 391
            ...:..|..  ..:..::..|:..||....|::.|||:|:|.. .|.:|.:.||||.|:..||:.
plant   334 DFRVSGSTS--AHQRGNDPLKITLVTIDEHLVNKVLAISYAIK-PDQIISSIVAGFVCIKNVDIS 395

  Fly   392 RQAVMLLSPQPRPLPPNALLL 412
            .:.:..:||....||...|:|
plant   396 EERITYVSPSAAELPSKILIL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbcNP_610876.1 CLP1 11..412 CDD:227910 143/409 (35%)
CLP1_P 116..301 CDD:406878 70/187 (37%)
CLPS5NP_198809.2 CLP1 6..421 CDD:227910 144/411 (35%)
CLP1_P 121..309 CDD:406878 70/187 (37%)

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