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Protein Alignment cbc and AT5G39920
DIOPT Version :10
| Sequence 1: | NP_610876.1 |
Gene: | cbc / 36494 |
FlyBaseID: | FBgn0033842 |
Length: | 423 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_198808.1 |
Gene: | AT5G39920 / 833989 |
AraportID: | AT5G39920 |
Length: | 107 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 97 |
Identity: | 24/97 - (24%) |
| Similarity: | 36/97 - (37%) |
Gaps: | 18/97 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 330 LPDSCMPIG-------------MKAEDNK-TKVVAVTPTPALIHHVLALSFAESVEDDVIGTNVA 380
||::.|.|. |.||.|: ...:..|...:.||..:....|..|...: ||
plant 7 LPENLMQIATLIQNGNTEGLTQMMAEFNENVNAILTTEGHSAIHLAVLGGHAGCVTVSI----VA 67
Fly 381 GFCCVTEVDMERQAVMLLSPQPRPLPPNALLL 412
|..|:..||:..:....:||....||....:|
plant 68 GIVCIKNVDIGEERFTYVSPSAAELPSKIFIL 99
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| cbc | NP_610876.1 |
CLP1 |
11..412 |
CDD:227910 |
23/95 (24%) |
| CLP1_P |
116..301 |
CDD:406878 |
|
| AT5G39920 | NP_198808.1 |
Clp1 |
<64..105 |
CDD:477931 |
11/40 (28%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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