DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4676 and AT4G15080

DIOPT Version :10

Sequence 1:NP_610853.1 Gene:CG4676 / 36465 FlyBaseID:FBgn0033815 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_193244.2 Gene:AT4G15080 / 827172 AraportID:AT4G15080 Length:718 Species:Arabidopsis thaliana


Alignment Length:142 Identity:41/142 - (28%)
Similarity:61/142 - (42%) Gaps:21/142 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 CQDCQTLVPPRSWHCEVCNVCVLKRDHHCRFTCCCIGHHNYRYFF----YYLVYMII-GSLAAAI 158
            |..|...|...|.||..|:.||...|||||:...|:|..||..|.    ..|::::| ..:..|:
plant   176 CTLCNAEVRKFSKHCRSCDKCVDCFDHHCRWLNNCVGRKNYMTFISLMAVSLLWLLIEAGVGIAV 240

  Fly   159 MESIYL--WHLHLDIYWRWSTLFT--IFAPVVSLMLSPSWESFYLVIYDLTLLGFAISSLLLVFH 219
            :..:::  ..:..:|..|....|:  .||.||.|..:.|    .|.::.|..|.|        ||
plant   241 IVRVFVNKKDMETEIVNRLGNGFSRAPFATVVGLCTAVS----MLALFPLGELFF--------FH 293

  Fly   220 WSIFKSGSVTRE 231
            ..:.|.|..|.|
plant   294 MLLIKKGITTYE 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4676NP_610853.1 DHHC 99..232 CDD:396215 41/142 (29%)
AT4G15080NP_193244.2 RTA1 <14..>64 CDD:461325
DHHC 171..307 CDD:396215 41/142 (29%)
Blue background indicates that the domain is not in the aligned region.

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