DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4676 and GABPI

DIOPT Version :10

Sequence 1:NP_610853.1 Gene:CG4676 / 36465 FlyBaseID:FBgn0033815 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster


Alignment Length:191 Identity:43/191 - (22%)
Similarity:77/191 - (40%) Gaps:59/191 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VDTSIRKELL--KPPLDAAQLARWHSCQDCQTLVPPRSWHCEVCNVCVLKRDHHCRFTCCCIGHH 137
            :||:.|..|:  :|.:          |:.|:.:.|.|::||.||..||.:||||..:..||||..
  Fly   252 MDTAERSGLMHGQPNI----------CEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGER 306

  Fly   138 NYRYFFYYLVYMIIGSLAAAIMESIYLWHL-HLDIYWRWSTLFTIFAPVVSLMLSPS-----WES 196
            ||   .:|:|.:.:..:|..:..::.|..: |         .|.:..|:...:|.|.     :|.
  Fly   307 NY---VWYIVGLALSEIALLLGANLTLTSICH---------PFMVVRPLGYPVLLPDDCSEVFEG 359

  Fly   197 FYLVIYDLTLLGFAISSLLLVFHWSIFKSGSVTRERGTRKYDRGLRGNLEMVLGKRMHLTW 257
            |.|.|      .|.::...|:                       :...:..:|.::.:|.|
  Fly   360 FDLGI------SFVVACYALL-----------------------ISSYIAFILARQAYLWW 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4676NP_610853.1 DHHC 99..232 CDD:396215 35/138 (25%)
GABPINP_608741.1 DHHC 262..399 CDD:396215 39/181 (22%)

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