DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)2 and pcgf2

DIOPT Version :10

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:NP_001025573.1 Gene:pcgf2 / 594961 XenbaseID:XB-GENE-1013680 Length:317 Species:Xenopus tropicalis


Alignment Length:313 Identity:82/313 - (26%)
Similarity:139/313 - (44%) Gaps:60/313 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLLRAVYCPECKASGGKEINELNLKSDDTLRSLIY 97
            :.|.||.||.||..|:..|.|::|::|||::|....:||.|.:...|....|:::||.||:.::|
 Frog    16 LMCALCGGYFIDAATIVECLHSFCKTCILRYLEAHKFCPMCDSQVHKGRPLLSIRSDKTLQDIVY 80

  Fly    98 KLVPGLYQRECKELADFKEQHDLVDEQTTDE-----------PEFFTTTELISLSLEYHPAMLHQ 151
            ||||||::.|.|...||...:....:.::.|           |  ....|.||||:::     .:
 Frog    81 KLVPGLFRDEMKRRRDFYA
SYSRSKDSSSAEQGQKVLEAGEAP--VQEEENISLSIQF-----SE 138

  Fly   152 CGPGEVPPTI------------YLQCAAGLPVELLKRFLCSKYNIETDNGLVEVEVTYKDEVLPT 204
            ....|:...:            :|:|.|.:.:..|.:||.:|.::.:.   .:||:.|::|.|..
 Frog   139 DARDEIQDLVDSEDLEKRNSLRFLRCPAAMTITHLAKFLRNKMDVPSK---YKVEILYEEEPLKD 200

  Fly   205 NFTLMDVAYCYNWSRESPMAFCYRILLYDNEQTKNDENNLSRINQDIEPE-HSVRRSKSAKSVTF 268
            .:||||:||.|.|.|..|:...||                      ::|. ..:|.|:....:.|
 Frog   201 YYTLMDIAYIYPWGRTGPLPLKYR----------------------VQPTCKRLRFSRPRSLLDF 243

  Fly   269 AEDLESEIDSGSPRSKVRCKTPPK----VSPSSKNKRLTSSKREAEPESPVSN 317
            .....||.:|.|.::......|..    .||::..:...:...|..|.|.:.|
 Frog   244 NRGTTSEGESTSDKASSPAPVPSTSSSLPSPATPCQGSPNPNTELPPSSVLQN 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 RING-HC_PCGF5 23..117 CDD:438395 35/83 (42%)
RAWUL_PCGF2_like 137..228 CDD:340602 27/102 (26%)
pcgf2NP_001025573.1 RING_Ubox 6..99 CDD:473075 35/82 (43%)
Ubl1_cv_Nsp3_N-like 129..224 CDD:475130 27/102 (26%)

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