DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)2 and Chfr

DIOPT Version :10

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:NP_001276506.1 Gene:Chfr / 231600 MGIID:2444898 Length:664 Species:Mus musculus


Alignment Length:173 Identity:32/173 - (18%)
Similarity:67/173 - (38%) Gaps:47/173 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LQNTHNTMESNAAMDA------------ASPASRDVR-------QFHDLITCRLCRGYMIDPTTV 48
            |:.....|:.:..:|.            |..:|.||:       :..:.:||.:|:..:.|..::
Mouse   252 LEPAKKKMKGDGELDTNLQLLVSGQRGNAQTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSL 316

  Fly    49 DYCYHTYCRSCILKHLLRAVYCPECKA-----SGGKEINEL----------NLKSDDTLRSLIYK 98
            ..|.||:|.:|....:.|:..||.|:.     .....:|.|          ..:|::.:||:..:
Mouse   317 QPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVRSMDAR 381

  Fly    99 LVPGLYQRECKELADFKEQHDLVDEQTTDEPEFFTTTELISLS 141
                  .:..:::...|.:....||:.:.|       :|:.||
Mouse   382 ------NKITQDMLQPKVRRSFSDEEGSSE-------DLLELS 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 RING-HC_PCGF5 23..117 CDD:438395 22/115 (19%)
RAWUL_PCGF2_like 137..228 CDD:340602 3/5 (60%)
ChfrNP_001276506.1 FHA_CHFR 16..124 CDD:438724
COG3456 39..>252 CDD:442679 32/173 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..220
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..264 2/11 (18%)
rad18 279..>502 CDD:273165 29/146 (20%)
RING-HC_CHFR 299..352 CDD:438166 13/52 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..413 7/30 (23%)
zf-CRD 466..620 CDD:465602
zf-CCHH 632..655 CDD:463043
Blue background indicates that the domain is not in the aligned region.

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