DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(z)2 and pcgf3

DIOPT Version :10

Sequence 1:NP_001260933.1 Gene:Su(z)2 / 36432 FlyBaseID:FBgn0265623 Length:1396 Species:Drosophila melanogaster
Sequence 2:XP_073778461.1 Gene:pcgf3 / 101884364 -ID:- Length:250 Species:Danio rerio


Alignment Length:232 Identity:64/232 - (27%)
Similarity:109/232 - (46%) Gaps:46/232 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ITCRLCRGYMIDPTTVDYCYHTYCRSCILKHLLRAVYCPECKASGGKEINELNLKSDDTLRSLIY 97
            ||||||.||:||.|||..|.||:||||::|:|.....||.|:....:......:..|.|::.::|
Zfish    23 ITCRLCEGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQDIVY 87

  Fly    98 KLVPGLYQRECKELADFKEQ-----------------------------------HDLVDEQTTD 127
            ||||||.:.|.|:..||.::                                   .:..:|:..:
Zfish    88 KLVPGLQEAEMKKQRDFYQKLGMEVPGDIKGELCNMKIHPDSQRNGELKSEDPASKEAGEEKAEE 152

  Fly   128 EPEFFTTTELISLSLEYHPAMLHQCGPGEVPPTIYLQCAAGLPVELLKRFLCSKYNIETDNGLVE 192
            :.::..:.|.:|:.||.:.:.|...      ...:::|:|...|..||:|:..|.|:.:.|   |
Zfish   153 DNDYHRSDEQVSICLECNSSKLRGL------KRKWIRCSAQATVLHLKKFIAKKLNLTSFN---E 208

  Fly   193 VEVTYKDEVLPTNFTLMDVAYCYNWS-RESPMAFCYR 228
            :::...:|:|..:.||..|... .|. ::||:...||
Zfish   209 LDILCNEEILGKDHTLKFVVVT-RWRFKKSPLLLHYR 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(z)2NP_001260933.1 RING-HC_PCGF5 23..117 CDD:438395 38/83 (46%)
RAWUL_PCGF2_like 137..228 CDD:340602 22/91 (24%)
pcgf3XP_073778461.1 None

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