DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17019 and APD2

DIOPT Version :9

Sequence 1:NP_001286365.1 Gene:CG17019 / 36425 FlyBaseID:FBgn0033783 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_195765.3 Gene:APD2 / 831860 AraportID:AT5G01450 Length:444 Species:Arabidopsis thaliana


Alignment Length:494 Identity:103/494 - (20%)
Similarity:165/494 - (33%) Gaps:149/494 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 SKPGSSSSKADASSQSS---FEELGAIGGISDESK------------------ANTDTNSSHLDQ 340
            |.|.||||......::.   ||..|...|.....:                  .|...||:..|.
plant     6 SLPSSSSSPPVTREETGFHRFEHHGNDSGFDHRDRPPWNRSEYDYRHGSVVASENVRNNSTSEDP 70

  Fly   341 WQVLEV--------------------------NRIEAVEETPTTSAADEILEVTLRSRPAVEGDD 379
            |..:.|                          |....::  ||:.....::         ||   
plant    71 WSCVVVVATFCIFVSMTLILGLYGTTNVWLGPNSSFLIK--PTSVFVQNVI---------VE--- 121

  Fly   380 SEMGESTQAL---NVNQRP-----ANPSPAFYPAVPQRTKKVTRRRSDGYLNR--RYHSSDDESP 434
             |:|.....|   .:||.|     ...|...|.|||..:.|...:    |||:  |...|.:...
plant   122 -ELGNKGSGLILYGLNQAPQLDVLTKWSEVHYLAVPNDSYKYWIQ----YLNKGSRVKVSYNVES 181

  Fly   435 VAPGGPGLSL----GLSTLSEHPEHGLHPHSHRQSCQRCGKNKTNIRRHVEKMRRHLENSQMSEE 495
            |   |..|.|    |:..|||..:....|             .|.:..|:      :.:|...|:
plant   182 V---GSSLYLVIAQGVDGLSEWVQDPTRP-------------DTTLSWHI------ISDSGYIEQ 224

  Fly   496 DIKRELQEFL----TYLEQRTKSV---------DASDADSHAVSPLSVDAISVAAGGRSPDMPIT 547
            ||.:....::    .||.:...::         |.::|..:...|.....:||...|.:..:..:
plant   225 DITKSSSYYVAVGNVYLNEVKATIDIQVEGVLYDTTNAYYNCSFPNDKCTLSVPLFGTNAAVLTS 289

  Fly   548 PTIEFSPTQDEDIRWDDDEGIHVYAAPSDFEP-------TAGIDSRFVNLED--FEDLKDL-EGL 602
            |..:.:.:::|            :.|...:||       ..|:.:..:.:..  |...:.: |..
plant   290 PGPKLNNSKNE------------FCAKLSYEPRWIAYIVCMGVVTALLLIVSSLFNKRQPVTEDE 342

  Fly   603 TVKQLKEV--LMLHRVDYKG--CCEKQELLDRVSRLWKTMRECPAVEKLATDELCKICMDAPIEC 663
            ||.:..:|  |:..:.|...  |.....:|.....|.....|..:    :|..||.||.|||.:|
plant   343 TVDENDDVAPLIPGKDDDNSSWCSSYSSILTSTEELEGAHGEGHS----STRYLCAICYDAPRDC 403

  Fly   664 VFLECGHMATCTSCGKVLNE----CPICRQYIVRVVRFF 698
            .||.|||...|..||..:.|    ||:||:.|.:|.:.|
plant   404 FFLSCGHCVACFQCGTRIAETSGFCPVCRKKIRKVKKIF 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17019NP_001286365.1 FYVE_CARP 1..42 CDD:277289
zf-C3HC4_3 650..694 CDD:290631 22/47 (47%)
APD2NP_195765.3 DUF4792 129..197 CDD:406448 20/74 (27%)
DUF4793 221..328 CDD:406449 17/118 (14%)
RING_Ubox 392..431 CDD:418438 19/38 (50%)
RING-HC finger (C3HC4-type) 393..431 CDD:319361 18/37 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4202
eggNOG 1 0.900 - - E1_KOG4275
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm3123
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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