DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17019 and Rffl

DIOPT Version :10

Sequence 1:NP_610827.2 Gene:CG17019 / 36425 FlyBaseID:FBgn0033783 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_006534053.2 Gene:Rffl / 67338 MGIID:1914588 Length:432 Species:Mus musculus


Alignment Length:718 Identity:151/718 - (21%)
Similarity:197/718 - (27%) Gaps:421/718 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CESCGVEFTVFRRKRACFDCKRYYCANCIAS-----RRCKRCSVFAQRPLSRTDLLKLKPKDLIF 62
            |::|||.|....||:.|.|||:.:|..|.:.     |.|..|..|......|.:|:|:|.|||..
Mouse   116 CKACGVHFASTTRKQTCLDCKKNFCMTCSSQEGNGPRLCLLCLRFRATAFQREELMKMKVKDLRD 180

  Fly    63 YLQSKHISTEGCLEKEELVGLVLTH---VAQVDRSRGSNASSNSPGRGQANPIDSLKQSCQNFFS 124
            ||....||||.|.||||||.|||..   :::.||:|       .|...||.|             
Mouse   181 YLSLHDISTEMCREKEELVFLVLGQQPVISEADRTR-------VPHLPQAFP------------- 225

  Fly   125 NLSDNISDSLASFDSKVTTKPPESRQPEVPTHIFEQPRVSTREIPTYASAVNGGPQHVHVQQQAT 189
                                                                        :|||.
Mouse   226 ------------------------------------------------------------EQQAF 230

  Fly   190 TTNGGSQSSSSPSTSTQSSNNRDASSSSQAHVAHQEARNEEQEDAQSKSDCECSDEEIMATFSER 254
            .|.  .|:|:.|.||                                                  
Mouse   231 LTQ--PQTSTVPPTS-------------------------------------------------- 243

  Fly   255 VSISLKTDTSGRRVNAAAEPSPVDLANVDNGPAGNTAPSPGCSKPGSSSSKADASSQSSFEELGA 319
                                                        ||..||.|..:|         
Mouse   244 --------------------------------------------PGLPSSPAQVTS--------- 255

  Fly   320 IGGISDESKANTDTNSSHLDQWQVLEVNRIEAVEETPTTSAADEILEVTLRSRPAVEGDDSEMGE 384
                                                 ...|.|:                    |
Mouse   256 -------------------------------------VPLAQDQ--------------------E 263

  Fly   385 STQALNVNQRPANPSPAFYPAVPQRTKKVTRRRSDGYLNRRYHSSDDESPVAPGGPGLSLGLSTL 449
            :.||:                              |::     |.|.|.|:.|            
Mouse   264 TQQAV------------------------------GHV-----SQDHEEPIFP------------ 281

  Fly   450 SEHPEHGLHPHSHRQSCQRCGKNKTNIRRHVEKMRRHLENSQMSEEDIKRELQEFLTYLEQRTKS 514
                          :|..|                                     ...|..|:|
Mouse   282 --------------ESTAR-------------------------------------VPTEDETQS 295

  Fly   515 VDASDADSHAVSPLSVDAISVAAGGRSPDMPITPTIEFSPTQDEDIRWDDDEGIHVYAAPSDFEP 579
            ||:.|:                                                        |.|
Mouse   296 VDSEDS--------------------------------------------------------FVP 304

  Fly   580 TAGIDSRFVNLEDFEDLKDLEGLTVKQLKEVLMLHRVDYKGCCEKQELLDRVSRLWKTMRECP-- 642
                 .|..:|.|...|:|:|||||:||||:|..:.|:|||||||.||::||:||:|..:...  
Mouse   305 -----GRRASLSDLTHLEDIEGLTVRQLKEILARNFVNYKGCCEKWELMERVTRLYKDQKGLQHL 364

  Fly   643 ----------AVEKLATDELCKICMDAPIECVFLECGHMATCTSCGKVLNECPICRQYIVRVVRF 697
                      ||.....:.|||||||:||:||.||||||.|||.|||.:|||||||||::|.|..
Mouse   365 VSGNEDQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHV 429

  Fly   698 FRA 700
            ||:
Mouse   430 FRS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17019NP_610827.2 FYVE_CARP 1..42 CDD:277289 16/43 (37%)
RING-HC_CARP 651..698 CDD:438163 34/46 (74%)
RfflXP_006534053.2 FYVE_CARP2 113..161 CDD:277309 16/44 (36%)
RING-HC_CARP2 381..430 CDD:438367 34/48 (71%)

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