DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17019 and APD4

DIOPT Version :10

Sequence 1:NP_610827.2 Gene:CG17019 / 36425 FlyBaseID:FBgn0033783 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001118468.1 Gene:APD4 / 6240532 AraportID:AT2G38195 Length:399 Species:Arabidopsis thaliana


Alignment Length:388 Identity:90/388 - (23%)
Similarity:141/388 - (36%) Gaps:89/388 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 EAVEETPTTSAADEILEVTLRSRPAVEGDDSEMGESTQALNVNQRPANPSPAFYPAVPQRTKKVT 414
            |.|...|.:|...:...:.::|..|.|.|.|:.|......|   ..:.||..|......|...|:
plant    64 ETVWLGPNSSILVKPSSIFVKSINAKELDFSKPGLQLYGFN---GQSTPSGYFVNWTESRVLSVS 125

  Fly   415 RRRSDG---YLNRRYHSSDDESPVAPGGPGLSLGLSTLSEHPEHGLHPHSHRQSCQRCGKNKT-- 474
            :....|   ||||..|.:...: :.|.|..:.|.::       .|: |..:|.|.:......|  
plant   126 QNSYKGWPYYLNRGTHMNISYN-ILPKGSAVRLVIT-------EGM-PFFYRSSLKDIAFRDTAW 181

  Fly   475 --NIRRHVEKMRRHLENSQMSEEDIKRELQEFLTYLEQRTKSVDAS-DADSHAV----------S 526
              |:          ::.|.|.:.||.:....:||....:.|.|:.. |.|...|          .
plant   182 SWNL----------IQGSGMIQLDISKSKGYYLTVANLKRKDVEVELDIDVKVVLYDTKQSSYNC 236

  Fly   527 PLSVDAISVAAGGRSPDMPITPTIE-----FSPTQDEDIRWDDDEGIHVYAAPSDFEPTAGIDSR 586
            ..|....|.....|||       :|     .||...:.:..||:..|.:     .::|      |
plant   237 SFSNGECSFKMNERSP-------VENYAVVTSPALGQGVSIDDEWYIEL-----SYQP------R 283

  Fly   587 FVNLEDFEDLKDLEGLTVKQLKEVLMLHRVDYKGCCEKQELLDRVSRLWKTMRECPAVEKLATD- 650
            .:....|      .|:.:..:  ::.:|..:...||..:..|....    ::|.|...:|...| 
plant   284 LIAYGSF------TGVLLSFM--LVAIHFCNKLKCCGGEGFLSEDD----SVRTCLLADKGDNDC 336

  Fly   651 ---------ELCKICMDAPIECVFLECGHMATCTSCG----KVLNECPICRQYIVRVVRFFRA 700
                     .||.||.|||.:|.||.|||..:|..||    :....|||||:.|:.|.|.:.|
plant   337 CNDVEASNKSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRIYTA 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17019NP_610827.2 FYVE_CARP 1..42 CDD:277289
RING-HC_CARP 651..698 CDD:438163 24/50 (48%)
APD4NP_001118468.1 DUF4792 97..162 CDD:464988 16/75 (21%)
DUF4793 191..301 CDD:464989 25/135 (19%)
zf-C3HC4_3 344..390 CDD:464042 21/45 (47%)
Blue background indicates that the domain is not in the aligned region.

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